Gene MmarC7_1646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1646 
Symbol 
ID5328350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1595869 
End bp1596537 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content35% 
IMG OID640794200 
Producthypothetical protein 
Protein accessionYP_001330855 
Protein GI150403561 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00266] conserved hypothetical protein TIGR00266 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.158074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.97381 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACT ACGATTTTGA AATAACGAGC AGACCTTCAT ACTCCCTTTT AAAAATAAAC 
TTAAACAATC AGGAAATAAT GACAGAAACA GGTTCAATGG TTTATAAAGA TGTTGGGGTA
AATATCGAAA CATCTGCTAA AGGCGGAGTT TTAGGTGTTT TAAAAAGGGC AGTTGTTGGA
GAAAGCATAT TTATGAATAA ATTAAGTGGT TCTGGAAAAC TTGCACTTGC ACCGGGATTT
TCTGGAGATA TAATTCACCA TGAACTCAAT GGAACCTTAT ATGCAAGTAG CGGTGCGTAC
TTAGCATCTT CACCAGATTT ATCAATTGAT ACGAAATTTG GTGGTGGAAA AACATTTTTC
GGTGGAAAAG GACTTTTTTT AATGAAAATT GAAGGTTCAG GAGATGTATT TTTATCATCA
TACGGTGCAA TCGAAGAAAT AGAATTAGAC AATGAATCAA TAATGGTCGA TAATGGAAAT
TTAGTTGCAT TTACCGGTGA TTTAAAATAT AATCTTGGAA AAGTGGGCGG TTTAAAATCA
ACACTTCTTG GTGGCGAAGG TTTAGTCTAC AATTTCAGCG GAACGGGTAA AGTTTATATT
CAGACCAGAA ATATCGAAAG TTTCATTGAT TTCATAACTC CGTACCTTCC AACACCAAAA
CAAGGATAA
 
Protein sequence
MADYDFEITS RPSYSLLKIN LNNQEIMTET GSMVYKDVGV NIETSAKGGV LGVLKRAVVG 
ESIFMNKLSG SGKLALAPGF SGDIIHHELN GTLYASSGAY LASSPDLSID TKFGGGKTFF
GGKGLFLMKI EGSGDVFLSS YGAIEEIELD NESIMVDNGN LVAFTGDLKY NLGKVGGLKS
TLLGGEGLVY NFSGTGKVYI QTRNIESFID FITPYLPTPK QG