Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_1605 |
Symbol | valS |
ID | 5329300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 1557483 |
End bp | 1560143 |
Gene Length | 2661 bp |
Protein Length | 886 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640794159 |
Product | valyl-tRNA synthetase |
Protein accession | YP_001330814 |
Protein GI | 150403520 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0525] Valyl-tRNA synthetase |
TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATAA AAGAAGAATA TTCAATAGAA CTTGAAAAAA AAGTTCAGGA AAAATGGGAA GATGAAAAAA CATTCAAATT TTTAGAAGAT GAAAAAAGGC CCCCATATAT TATAGACACA CCTCCACCAT ATCCAACGGG TAGAATGCAC CTTGGACACG GTCTTAACTG GACATATATG GACATTATTG CGAGATTTAA AAGAATGAAT GGATATGATG TGCTTTTCCC CCAAGGCTGG GACTGCCACG GACTTCCAAC CGAAGTTAAA GTTGAAGAAT TAAACAATAT CACAAAGTCC GATATTGACA GACACGAATT TAGAAGACTC TGTGTAGAAT TAACCGATGA AAACGTAGAA AAAATGAGAA ACCAGGTTAA ATCCCTTGGA ATCTCGATCG ATTGGGATAG GGAATATATT ACAATGAATC CCGACTACGT TAGAAAATCA CAGACTGCAT TTTTAAAAAT GTACGAAAAA GGACTGATTT ACAGGGGGAA ACACCCAGTA AACTGGTGCC CAAGATGTGA AACTGCGATT GCATTTGCAG AAGTAGAATA TCAAGAAAGA ACTTCCAAAT TAAACTACAT AAAATTCCCT TACGCTGAAA ATGCTGAAAA ATACCTTGAA ATTGCAACAT CAAGACCCGA ATTAATGGCT GCCTGTGTTG GAATTGTTGT ACATCCTGAA GATGAAAGGT ACAGCGATGT TATTGGAAAA ACAGTTAAAG TTCCATTATT TAATCAGGAA GTTACAGTTT ACCCTGATTC CGATGTAGAA CAAGACTTTG GTACCGGAGT TGTAATGGTA TGTACTTTTG GTGACAAAAC CGATGTTACA TGGGTAAATA GGCATAAATT AGAAGTTAAA AAAGCAATTA ACGAAAAAGG ACAGCTTACA GAAATCTGTG GAAAATACGC AGGTCAAAAA TCAGACGATG CACGAAAAGA AATTATTTCA GACTTAATAT CCGAAGACTA CATGATAAAA CAAGACCCCC TTGAACAGAA CGTTGGTTCA TGCTGGAGAT GTAAAACCCC TATCGAGATT ATTGTTGGAG ATCAGTGGTT TGTAAACGTT ACAAAGTTAT TAAAAGAAGT AGAAAACGCT GCAAACGAAA TTTCATGGGT TCCAGAGCAT ATGAAAGCAC GACTTTTAAA ATGGGTCGAA GATATGGGCT GGGACTGGTG TATTTCAAGG CAGAGATTGT TTGCAACCCC AATTCCAGTA TGGTACTGTA AAGACTGTGG GGAAATTATT GTAGCTAAAC CTGAAGATTT ACCAATAGAC CCAACAAAAG AAAGCCCGTA CACCTGTAAA TGTGGAAACT CAAAGCTTGT TGCAGAAACC GATGTTTTGG ACACTTGGAT GGATTCATCA ATTACTCCAC TCGTTATAGC AGGATGGCTC GAAGATGAAG AATTCTTCAA AAAACACTAC CCTGTTCAAT TAAGACCTCA AGGTCATGAT ATCATCAGAA CATGGGCTTT TTACACAATT GTTAGATCAC TTGCAATCAC CGGCGAAAAA CCATGGGATG AAATCGTAAT TAACGGAATG GTTTTCGGCG AAGATGGCTT TAAGATGAGT AAAAGTAGAG GAAACGTTGT TGAACCCGGA GAAATTACCA AAACTTACGG TGCAGATGCT TTAAGGCTAT GGGCTTCAAA CAGCACCATT GGAAAGGACG TTCCATTCGC TTGGAAAGAA GTAGAATACG GTGGAAGGTT TTTGCGAAAA ATATGGAATG CATGTAAATT TGCAAAAATG AACATTTCTG ATGAAGTAAT TTCTGAATTG AAAACCATAA ACACCATTGA AATTGAAAAT CCTGTTGATT TGTGGATTTT GAGTAAATTA AATGATCTAA TTTCAAAAGT TTCAAAAGAT CTTGGAAATT ACAAGATAAA TACAGTTGTA GAAATTCAAA AATTCTTATG GCATGAATTC TGTGATAACT ACATCGAAAT GGTAAAACAC AGACTTTACA GCAAAGAAGA ATCTGAAAGC GCTCAAAAAG AAAAATTAAT GGCACAATAC ACCCTTTATA AAGTAATTAC AGAATCTGTA AAATTACTTA CGCCATTTAC CCCGCACTTT GCAGAAATTG TCGGACAAAT CTACGAAATT GATAATTTGC ATACCTCATG GCCAGTTGCG GATGAAAGCT TGATAAGTTT AGAAAACGAA TTTGTCGGAG AAGTTGCAAA AAATACGGTT GCGTCAATTC GAAGATATAA ATCAAACAAA GGAATGCCAC TTAATGCAGA ATTAAATAAA GTTGAAATGT ACGTAAGCGA TGAAAAAGAT TTCAATGCTC TTTCAAAAGT TTCAAAAGAT ATTGAAAAAT CTTTGAAAAT TAAAGAATTA GAAATAAATC TTGGAAAACC ACTTCTAGAA CAGAAGATTG CAGAAGTGAC TCCGAACAAG TCCAAAATCG GTCCAGAATT TAAAAAAGAT GCTGGAAAAG TAACTGCATT TATCAAAGAA GCTGATGCAG AAACGATTGA AAAAATCCTT TCAGAAGGAA TTGAAACCGA ATTTGGCGTT TTAAACAAAG AACACATCAA AGAAGTAAAA AGAGCAATAT ATAACAAAGG AGAAATTGTT GAAACTGCAG ATATTGACAA TTTGATCGAT ACAATTGCAA TAATCCAATA A
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Protein sequence | MEIKEEYSIE LEKKVQEKWE DEKTFKFLED EKRPPYIIDT PPPYPTGRMH LGHGLNWTYM DIIARFKRMN GYDVLFPQGW DCHGLPTEVK VEELNNITKS DIDRHEFRRL CVELTDENVE KMRNQVKSLG ISIDWDREYI TMNPDYVRKS QTAFLKMYEK GLIYRGKHPV NWCPRCETAI AFAEVEYQER TSKLNYIKFP YAENAEKYLE IATSRPELMA ACVGIVVHPE DERYSDVIGK TVKVPLFNQE VTVYPDSDVE QDFGTGVVMV CTFGDKTDVT WVNRHKLEVK KAINEKGQLT EICGKYAGQK SDDARKEIIS DLISEDYMIK QDPLEQNVGS CWRCKTPIEI IVGDQWFVNV TKLLKEVENA ANEISWVPEH MKARLLKWVE DMGWDWCISR QRLFATPIPV WYCKDCGEII VAKPEDLPID PTKESPYTCK CGNSKLVAET DVLDTWMDSS ITPLVIAGWL EDEEFFKKHY PVQLRPQGHD IIRTWAFYTI VRSLAITGEK PWDEIVINGM VFGEDGFKMS KSRGNVVEPG EITKTYGADA LRLWASNSTI GKDVPFAWKE VEYGGRFLRK IWNACKFAKM NISDEVISEL KTINTIEIEN PVDLWILSKL NDLISKVSKD LGNYKINTVV EIQKFLWHEF CDNYIEMVKH RLYSKEESES AQKEKLMAQY TLYKVITESV KLLTPFTPHF AEIVGQIYEI DNLHTSWPVA DESLISLENE FVGEVAKNTV ASIRRYKSNK GMPLNAELNK VEMYVSDEKD FNALSKVSKD IEKSLKIKEL EINLGKPLLE QKIAEVTPNK SKIGPEFKKD AGKVTAFIKE ADAETIEKIL SEGIETEFGV LNKEHIKEVK RAIYNKGEIV ETADIDNLID TIAIIQ
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