Gene MmarC7_1527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1527 
Symbol 
ID5328189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1489334 
End bp1490134 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content34% 
IMG OID640794081 
ProductNifC-like ABC-type porter 
Protein accessionYP_001330736 
Protein GI150403442 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0555] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR01581] NifC-like ABC-type porter
[TIGR02141] molybdate ABC transporter, permease protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00122012 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAATA ATGATTTTTT AAAATTTTTT TCACTTTTTG CACTATCTGT ATTCATATTG 
TTCATATTAA TGATAGTGAT GTCCATCGTT ACGAACATAT CTTTAGAAAC GTTTTACTAT
GCGTTATTCT CAAAAGAAAT CCAGTTTGCA ATAAAATTAA GCCTTGAAAC TGCGAGCATT
GCAACAATAT TTGGAACATT ACTTGGCGTT CCTGCGGCAT ACGCACTTGC AAGATACGAC
TTCAAAGGAA AAAATATCGT TGACAGCGTT GTCGAACTTC CAGTAATTCT TCCACCATTA
ATAACTGGCT TTGCGTTACT GGTATTTTTT GGGAATACGG TGTTTGGAAA ATTTATAACA
GAACATATAA TCGAAATCCT TTTTACATAC AAAGGAACGA TTGTTGCACA GTTTTTCGTT
GCAACACCAT TTATAATAAG AACATCTAAA TCAGTATTTG AATGCATTGA TGAAAAGTAC
GAACTTATTG CCCAAAGTCT CGGCTCTAAA AAATACGAAA GTTTCCTCGA TGTTGTAATT
CCGATGGCCA AAAATGGAAT TATTGCAGGA GTGATACTTG CCTGGGCAAG AAGCATTGGG
GAATTTGGGG CTACAATGAT GCTTGCAGGG GCTACAAAGA TGAAAACAGA AACACTTCCA
ATAGCGGTGT TTTTAAATAT TTCACTTGGA GACCTTGAAA AAGCACTTGC GGTATCATTG
ATATTTTTAA TTGTCGCAAC TTTAGTATTA TTTATAATTA GATTGATTTT AAAAATAGGT
GAGAACAATG ATAGACTTTA A
 
Protein sequence
MKNNDFLKFF SLFALSVFIL FILMIVMSIV TNISLETFYY ALFSKEIQFA IKLSLETASI 
ATIFGTLLGV PAAYALARYD FKGKNIVDSV VELPVILPPL ITGFALLVFF GNTVFGKFIT
EHIIEILFTY KGTIVAQFFV ATPFIIRTSK SVFECIDEKY ELIAQSLGSK KYESFLDVVI
PMAKNGIIAG VILAWARSIG EFGATMMLAG ATKMKTETLP IAVFLNISLG DLEKALAVSL
IFLIVATLVL FIIRLILKIG ENNDRL