| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1428 |
|---|
| Symbol | |
|---|
| ID | 5329612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 1395378 |
|---|
| End bp | 1396679 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640793986 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001330642 |
|---|
| Protein GI | 150403348 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.1615 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.318951 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTTT ATTTTAGAGG CGGTGCTTCT GAAGTTGGAA GAAGTTGTGT AGAGGTCAAA
ACCGAAAAAA GTACAGTTTT ATTTGACTGC GGTGTAAAAT TATCGTCTGA AGAATCAGAA
TATCCAATCC TAGATAATTT AAATGCAGAT TGTGTCTTTG CATCACATGC ACACCTCGAT
CACACGGGCG GAATTCCAGT ACTCATCAGA AAAGGAATGG TTCCTGCAAT TTATGCTACA
GAAGTTACAA AAGCAATATC TAAAGAGCTT TTAAGAGATT CTATAAAAAT TGCAGGTGCA
GAAGGACAGG ATATTCCTTA CGATAAAGCG GATGTGAATA AATCATTAAA TCTCTTTAGA
AAAGCTCGCT ACAATCACCC CAAAAATTTC AAAGATTTCG AGTTTGAATT TTTTAATGCA
GGCCACATCC CTGGAAGTTC CACAATATCA CTAAATTACA GTGGAAAACG AGTCGTTTAC
ACGGGAGACA CTAAAGTAAG CGATACGGAT CTTGTAAAAG GTGCAGATCT GTCATATACA
AAAGAACATA TCGATTGCCT AATTGTTGAA TCAACATACG GGGATAGCAA TCAGGAAAAT
AGAGAAGAAG CTGAAAAAAA TTTCATAAAC AAAATAAAAG AAACACTTGA TCGAGGAGGA
ATTCCCCTTG TTCCGGTATT TGCAGTTGAT AGAAGTCAAG AAATCTTGAT GATATTAAAC
AAGCACGATT TTGGAGTTCC AGTATACTTT GACGGCCTTG GAAGAAAAAT TACAAGGATA
ATGTTGCAGT ATCCTGCATT TTTAAACCAT CCTGACGATT TAAAGGCAGC ATTTTTGAAC
GTTACAGAAG TTGAATCAAA AGATAGGCCA AAAATAATAA AAGAAATCAG GCAGAACGGT
GGAATAATTG TAAGTACTGC GGGAATGCTT GAAGGGGGCC CAATAATCCC ATACATTACC
GAATTTATGA AAGAACCTAA AAATTCGCTG ATATTTACCG GATATCAAGT TGAAGAAACC
GCTGGAAGGC ACTTGCTTGA AACTGGAAAA CTTGAGATAG GGGAATTCGA TGTGGAACCG
AAATTCGAAA TTGCATCATA TCAGTTTTCA GCACATGGCG AAATGGATGA ATTAAGACAT
ATTGTAAAAA AAGCAAATCC TGAAACCCTC GTAATCCAGC ACGGTGAGGA AGAGGTTGTA
AACGTATTCA AAGACTGGGC TGTTTCGGAA GGATTTAATG AAAATAAAGT ATTCGCTCCA
AAAGTTGGAA ATAGAATAAA CTTAACTGAA GTTTTAAAAT AA
|
|---|
| Protein sequence | MELYFRGGAS EVGRSCVEVK TEKSTVLFDC GVKLSSEESE YPILDNLNAD CVFASHAHLD
HTGGIPVLIR KGMVPAIYAT EVTKAISKEL LRDSIKIAGA EGQDIPYDKA DVNKSLNLFR
KARYNHPKNF KDFEFEFFNA GHIPGSSTIS LNYSGKRVVY TGDTKVSDTD LVKGADLSYT
KEHIDCLIVE STYGDSNQEN REEAEKNFIN KIKETLDRGG IPLVPVFAVD RSQEILMILN
KHDFGVPVYF DGLGRKITRI MLQYPAFLNH PDDLKAAFLN VTEVESKDRP KIIKEIRQNG
GIIVSTAGML EGGPIIPYIT EFMKEPKNSL IFTGYQVEET AGRHLLETGK LEIGEFDVEP
KFEIASYQFS AHGEMDELRH IVKKANPETL VIQHGEEEVV NVFKDWAVSE GFNENKVFAP
KVGNRINLTE VLK
|
|---|
| |