| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1227 |
|---|
| Symbol | |
|---|
| ID | 5327959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 1201237 |
|---|
| End bp | 1203612 |
|---|
| Gene Length | 2376 bp |
|---|
| Protein Length | 791 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640793780 |
|---|
| Product | anaerobic ribonucleoside-triphosphate reductase |
|---|
| Protein accession | YP_001330441 |
|---|
| Protein GI | 150403147 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
|---|
| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.25361 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGTATCG CAATATTAAC CATTTTATTA ATTATTTGGC TTACTCTCTT TTTAGGTGGT
TCAATGATAG CTAATTCGAA ATATGCTGAT TTCAAAATAA ATGTTGTCAA AAGGAGTGGC
AACGAAGAAA CATTCAACGT CAACAAACTT GTAAAATCCC TTTTAAATTC AGGAGTAGAT
TATGAAAATA TAGATGCGAT ATTATCAGAA ATCTACGGTA AAGTTTACAA TGGAATGTCT
ACAGACGACT TAAAATCAAT TCTTTACAAA ACTTTGAAGG AATATGACAA AAAAACGGGT
AAAAGTTACT CTAAAAAATA CATGTCTGAA AACTGTTTAA AAATCAGAAC TTCAGAAAAA
GAATTTGAAC CATTTAATAA AGAAAAGATT GTAAAAGCGC TGATTCAAGA AGCTGGCGCT
GATTTAAAAA CTGCTGAAAG AATAGCGGTA GAAGTAGAAG CAGAAGTTAA AAATTTAACT
GTAAATTATT TAACTGCTCC AATGATTCGT GAAATTGTAA ATACGAAGCT TATTGAACAT
GGCCTGGAAG AATTCAGACA CAAACACACG AGACTTGGTA TTCCGGTTTA CGATATCGTT
AAATTAATCG AAAGAGGATC TAAAGACAAC GCAAACCTCA TGCACAACCC GGAAAGTATT
CACAAATGGG TTGCTGACGA AACGATGAAG CAGTTTGCAC TTTTGAACGT ATTTCCAAAA
TATATTGCAG ATTCTCACAT GAAAGGAGAT ATCCACCTCC ACGATTTAGA ATATGCTGCA
GTTAGAACTG TTTGCTGCCA GCACGACCTT AGAAACTTCT TCAAACACGG ATTAAAAGTA
GATGGTACTG GAAGACATAC AAGTGTTTCA AAACCTGCAA AACACCCTGA CGTTGCATTA
CAACATGCTG CAAAGGTTTT GAGTGCTGCT CAATGTGAAA TGTCTGGGGG ACAGTCTATA
GATGAATTTA ACATCTGGCT TGCACCATAC ATGAGAGGAC TCGACTATGA AGAAGTAAGG
CAACTCATGC AGTTATTCAT TTACGAAATG AACCAGATAT ATGCTGCAAG AGGTGGTCAG
GTCGTATTCA GTTCAATTAA CCTCGAATTA GAAGTTCCGG AATTTTTAAA AGGCGAAGAT
GCAATAAAAG CAGGCGCTGT TGTTGGAGCT TACGAAGAAT ACGATTACGA AGTTAAATTG
ATTGCAGAGG CACTTGTAGA TGTTTTAATG GATGGTGATG CATACGGAAA ACCATTTTTA
TTTCCTAACG TCATTTTTAA ATTAAGAGAA AATGCATTTA AAGATGAAAA TAAAGATTTA
CTCGTGAAAA TACATGAATT AAGTGCTAAA TGGGGATTAC CCTACTTTAT AAACATGCTT
GCAGACTATC AATATGGAAA TACCAATGCA ATGGGATGCA GAACTAGATT GAGCGGTGAA
TGGGGCAATT CGATTGAAGA AAGTTCACTT AGAACTGGAA ATATGCAGTG GTATACATTA
AACCTCCCAA GAATTGCTTA TGAAGCTGAT GGTGATGACG GAAGATTATT TGAGATACTT
GACGAAAAAT TAAGTCTCGC AAAACATGCT TTAGAGATAA AACATGATAT TTCAAAAAGA
AGACTCTACC ACGATAACGT TTTACCATTC TTAACACAGA AGTTCGATGG AGAACAGTAT
TACCGATACG ATAGCACAAC GAAAACTTTT GGATTCGTTG GTTTAAACGA ACTGTTAAAG
TACCATGTTG GAAGTGAACT TCACGAGTCA CCAGAAGCAC TCGCCTTTGG TATAAAAGTA
ATTTCACATA TCAGGAAATA TGCAGATGAC CTGAAAAAAG AAACAGGACT TAGATGGACC
GTAACCCAAA CTCCTGCTGA AAGTACTGCT GGAAGATTTG CAAAATTCGA CCACAGATAC
TACCCTGAAG AAACAAAATC CGTAGTAAAT GGCGATTTAA GCGATGTAAA CAGTATCTAC
TACACCAATT CTTCACACGT AAGGGTAAAT GCGGAAGTCA CTTTGGGTGA AAAAGTAAGC
ATTGAAGAAA AATTCCACGA ACTCTGTAAC GGTGGACACA TCGGACACTT CTGGAATGCT
GAAGCTTACG CAAACCCTGA AGTTTTAATG GATATAACCA GAAAAATGAC AAAAACAGAT
ATCGGATTCT GGACATACAC GAAAAATTTA AGTATCTGTG AAAAATGTAG CCTTGCAATG
AGTGGTTTAA AAGACAACTG TACTAACTGC GGAAGTGAAA ACGTAGAAAA ATTCTCAAGA
ATTACTGGAT ACCTGCAAAA CGTTTCAAAC TGGAACAAAT CAAAACAAAG AGAATTAATC
GATAGAAAAA GCACACTTCC TGGAAGAAGA GTTTAA
|
|---|
| Protein sequence | MGIAILTILL IIWLTLFLGG SMIANSKYAD FKINVVKRSG NEETFNVNKL VKSLLNSGVD
YENIDAILSE IYGKVYNGMS TDDLKSILYK TLKEYDKKTG KSYSKKYMSE NCLKIRTSEK
EFEPFNKEKI VKALIQEAGA DLKTAERIAV EVEAEVKNLT VNYLTAPMIR EIVNTKLIEH
GLEEFRHKHT RLGIPVYDIV KLIERGSKDN ANLMHNPESI HKWVADETMK QFALLNVFPK
YIADSHMKGD IHLHDLEYAA VRTVCCQHDL RNFFKHGLKV DGTGRHTSVS KPAKHPDVAL
QHAAKVLSAA QCEMSGGQSI DEFNIWLAPY MRGLDYEEVR QLMQLFIYEM NQIYAARGGQ
VVFSSINLEL EVPEFLKGED AIKAGAVVGA YEEYDYEVKL IAEALVDVLM DGDAYGKPFL
FPNVIFKLRE NAFKDENKDL LVKIHELSAK WGLPYFINML ADYQYGNTNA MGCRTRLSGE
WGNSIEESSL RTGNMQWYTL NLPRIAYEAD GDDGRLFEIL DEKLSLAKHA LEIKHDISKR
RLYHDNVLPF LTQKFDGEQY YRYDSTTKTF GFVGLNELLK YHVGSELHES PEALAFGIKV
ISHIRKYADD LKKETGLRWT VTQTPAESTA GRFAKFDHRY YPEETKSVVN GDLSDVNSIY
YTNSSHVRVN AEVTLGEKVS IEEKFHELCN GGHIGHFWNA EAYANPEVLM DITRKMTKTD
IGFWTYTKNL SICEKCSLAM SGLKDNCTNC GSENVEKFSR ITGYLQNVSN WNKSKQRELI
DRKSTLPGRR V
|
|---|
| |