| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1162 |
|---|
| Symbol | |
|---|
| ID | 5328897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 1130728 |
|---|
| End bp | 1131372 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640793717 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001330379 |
|---|
| Protein GI | 150403085 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1852] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTA GTAGTATGTG GATTTTTGAG TATTTGGGGA TAATTTCATC AATATTAATT
GTTTTAGCAA TTCTTTTATT GTTAACTGCA ATTATTCTCG GATATTATCT TTTAAAGAAG
AATAAAATCC TTTTTCCTAA ATTATCATTG TATATTACAA ATAACTTTTA TTCCATTCTA
TTAAGAATGT TTCTAATAAT TGGAACGGAA GATACATTTT ACAAAGTTGC GAGTGACTTT
TATAACAAGT ACTACTGCGA AGAATTTAAA AAATCAAAAA ATAAAGTTTT AATCCTTCCA
CACTGTTTGA GGGACTTAAA ATGCCCTGGA AAACTCGGTC CTGATGGGGT AGAGTGCATA
TTCTGTGGAA AATGTCCAAT TGGAAGAATA ATAAAAGTTG CTGAAGAAAA TGGCTACAAA
ACTTACGTGG TTCCAGGTTC TACTTTTTTA AAGAGAGTTT TAAAAGAGAA AAGGCCAGAC
GGAGTTTTTG CAGTAGCATG CCATAACGAC ATGTTTCATG GAATGAATTC ACTTTCGAGA
AAGAATATAC CTATTCAGGG ACAACTTTTA ATGAAGGATG GATGTATTTC AACACTCGTA
GATGTTGAAG AATTAATTAG TCGACTTAAA AATGAACCGT GTTAA
|
|---|
| Protein sequence | MDISSMWIFE YLGIISSILI VLAILLLLTA IILGYYLLKK NKILFPKLSL YITNNFYSIL
LRMFLIIGTE DTFYKVASDF YNKYYCEEFK KSKNKVLILP HCLRDLKCPG KLGPDGVECI
FCGKCPIGRI IKVAEENGYK TYVVPGSTFL KRVLKEKRPD GVFAVACHND MFHGMNSLSR
KNIPIQGQLL MKDGCISTLV DVEELISRLK NEPC
|
|---|
| |