| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1131 |
|---|
| Symbol | |
|---|
| ID | 5328536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 1097486 |
|---|
| End bp | 1098349 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640793686 |
|---|
| Product | branched-chain amino acid aminotransferase |
|---|
| Protein accession | YP_001330348 |
|---|
| Protein GI | 150403054 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
|---|
| TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase
[TIGR01122] branched-chain amino acid aminotransferase, group I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTT ATCTCGATGG AAAATTCGTA GAAAAAGAAG ATGCGAAAGT ATCAGTATAT
GACCACGGAT TGCTTTATGG TGACGGGGTT TTTGAAGGAA TCAGGGCATA TGATGGAGTA
GTATTTAAAT TAGAAGAACA TATCGAACGT TTATATGACT CAGCAGATTC GCTTGCAATG
AAAATACCTG TTTCAAAAGT AGAAATGGAA GAAATCGTTA TTGAAACGTT AAAGGCAAAT
GAATTAAAAG ATGCTTATAT AAGGCTCGTA GTTACAAGGG GAGTCGGGGA TTTAGGACTC
GATCCAAGAA AATGTCCAAA AGCAACAATT TTTTGTATTG CAGAATCCAT GAAACCGCTT
CTTGGAGAAG ACGGAATAAA AGTTATAACC TCCTCGATAA GAAGGTTGCC TGTTGATGTT
TTAAACCCTG CAGTAAAATC CTTAAATTAC CTAAACAGCA TTTTAGCAAA AATCCAGGCA
AATTATGCTG GAGTTCAGGA AGCTTTTTTA CTTGATAGCG AAGGATACGT TGCAGAAGGA
ACTGGGGACA ACATATTCGT TATTAAAAAT GGGAAAATAA AAACACCGCC TCTTTCTTCA
AGTGTTTTAA AAGGAATTAC AAGAGATACG GTTGTAGATC TTGCAAAAGA AGCAGGATAT
TCAATTTTCG AAGAAAAAAT GACATTACAC GATTTATTCG TTGCAGATGA GATATTTATC
ACTGGAACCG CAGCAGAATT AATCCACGTA GTTGAACTTG ATGGAAGAAT AATTAACAAC
GGAAAATTAG GCCCAGTTAC AAAAGATTTA AGCGACAGAT TCAAAGAAAT AAGGTCAAAA
ATCGGTAAAA AGTATATCGA GTAA
|
|---|
| Protein sequence | MKIYLDGKFV EKEDAKVSVY DHGLLYGDGV FEGIRAYDGV VFKLEEHIER LYDSADSLAM
KIPVSKVEME EIVIETLKAN ELKDAYIRLV VTRGVGDLGL DPRKCPKATI FCIAESMKPL
LGEDGIKVIT SSIRRLPVDV LNPAVKSLNY LNSILAKIQA NYAGVQEAFL LDSEGYVAEG
TGDNIFVIKN GKIKTPPLSS SVLKGITRDT VVDLAKEAGY SIFEEKMTLH DLFVADEIFI
TGTAAELIHV VELDGRIINN GKLGPVTKDL SDRFKEIRSK IGKKYIE
|
|---|
| |