| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1102 |
|---|
| Symbol | |
|---|
| ID | 5328783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 1070853 |
|---|
| End bp | 1071752 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640793649 |
|---|
| Product | pyridoxal biosynthesis lyase PdxS |
|---|
| Protein accession | YP_001330319 |
|---|
| Protein GI | 150403025 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
|---|
| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TAGGAACAGA CCTTTTAAAA CGAGGATTTG CTAAAATGGT AAAACACGGG
GTTGTAATGG ATGTTACAAA CGTGGAACAG GCACAGATTG CAGAAGACGC GGGAGCTGCT
GCGGTAATGG CTTTGGAAAG AGTTCCTGCC GATATCAGAG TACAGGGCGG CGTTGCAAGA
ATGTCTGACC CAGAAATGAT TTTAGAAATT AAAGACGCAG TATCAATTCC AGTAATGGCA
AAAGCAAGAA TTGGACACTT TGTAGAAGCT CAGGTGTTGG AATCAATCGG TGTTGACATG
GTTGACGAGA GCGAAGTTTT AACCCCTGCT GATGAAGTAA ATCACATCGA CAAAAGAGCA
TTCACAGCAC CATTTGTTTG CGGTGCAAGA AACTTGGGCG AAGCTTTAAG AAGAATTGAT
GAAGGGGCAG CAATGATCAG AACTAAAGGG GAAGCTGGAA CTGGAAACGT TGTTGAAGCT
GTAAAACACA TGAGGGCAGT TAACGAAGGA ATTGCAAGGG TTGTGGGATA CAAAGAAATG
GGCCTCGAAG CAGAATTAAT CCAAATGGCA AGAAACGAAT TAAAAGTTCC AATGGAACTT
ATTTCAGAAG TTGCAGAACT TAAAAGACTT CCAGTTGTAA ACTTTGCTGC GGGTGGAATT
GCAACACCTG CTGATGCTGC TTTAATGATG CAGATGGGCT GTGATGGGGT ATTTGTTGGA
TCAGGAATTT TCAAATCCGG AAACCCTGCA ACAAGGGCAA AAGCAATTGT TGAAGCAACC
TACAACTTTG ATAAGCCAGA TGTAATCGGA GAAGTAAGCA AAAACTTAGG GGAAGCAATG
GTTGGAATAA ACATCGATGA AATTCCAGAA GAAAAGCTCC TCGCAAAAAG AGGAATCTAA
|
|---|
| Protein sequence | MKKLGTDLLK RGFAKMVKHG VVMDVTNVEQ AQIAEDAGAA AVMALERVPA DIRVQGGVAR
MSDPEMILEI KDAVSIPVMA KARIGHFVEA QVLESIGVDM VDESEVLTPA DEVNHIDKRA
FTAPFVCGAR NLGEALRRID EGAAMIRTKG EAGTGNVVEA VKHMRAVNEG IARVVGYKEM
GLEAELIQMA RNELKVPMEL ISEVAELKRL PVVNFAAGGI ATPADAALMM QMGCDGVFVG
SGIFKSGNPA TRAKAIVEAT YNFDKPDVIG EVSKNLGEAM VGINIDEIPE EKLLAKRGI
|
|---|
| |