Gene MmarC7_1098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1098 
Symbol 
ID5329071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1067173 
End bp1068330 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content34% 
IMG OID640793645 
Productmajor facilitator transporter 
Protein accessionYP_001330315 
Protein GI150403021 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAAA AAATGAACGG TATTTACGTT CTATGGATCA CAATTTTTGT GACGATGCTC 
GGTATTGGTC TAATTGCGCC ACTTTTAGCA ATATTTGCAA AATCGTATGG TTTATCAAAT
TTTCAGATCG GGCTGATTTT TGGTTCTTTT GCACTAGTTA GGACAATCTT TCAACTTCCT
GCAGGAACAC TATCAGATAC TTACGGAAAA AAAATATTTT TGGTTGCAGG AACACTTCTT
TACGGGGTAA CCACTCTATT TTATGGATTG GTATCCGGAT TTGCAAGCAT GCTCATAGTC
AGGACTTTCA CAGGCGTATT TTCGGCATTT GTAAATCCTG TTGCAGGTTC GTATATTGCA
CAAGTCTCTC CGAAATCAAA ACTTGGGGAA TATATGGGAG TATTTAACTC CGCAGTATCT
TTAGGATTTG GCGTTGGACC ATTACTTGGA GGATTACTTG CGGATATGTA TGGAATTATG
GTTCCATTTT ACGTATGTGG TATTTTAGGA ATTATCGCAT CAATAATTGC TTATTACAAA
CTGGAAGATA TTTCCAAATC ACAAGAAAAA CAAAAATTAT CTGGTAAAAA ATTATTTTCG
CTTGAATTTT TAAAAATGAG AAATTTTAGC GCAGCTTTTA TAATAAATAT CGCGATAACA
ATTTCAAGGG GTGCACTTCT CGCATATTTA GCAATTTACG CGTATGATTA CGGAGTTTCT
GCTTTTAAAA TTGGAATAAT GCTTGCAGCA ATGAATATGG TTCTAGCAGT GACGCAGAAA
AAATTTGGAA AAATTTTCGA TAAAAATGGA AACAGAATAA TATTAAATGG AATAATTATT
GGAAATTTAG GGATGTATAT TCTTGCAATG TCCACATCGT TTACTTCAAT GTTTTTTTCA
TTAATTATCG CATCAATTGG GGCTTCAATG AGTACTCCAG GGATAAATTC AATTGCAATT
CGAGATATTC CGCATGAAAG AAAAGGTGAA GCAATGGGGC TTTACACTGC AAGCATAAAT
GTTGGAATAT TCGTTGGTGC AGTACTGCTA GGATATATTT CAGATATTGT TGGAATTTCA
AACATGTTTA AAATAGGGGC AGTATTTTCA TTTTTAATAA GTTATATTGC GTATGTTTTA
ATAAAAAATA AAAAATAG
 
Protein sequence
MQEKMNGIYV LWITIFVTML GIGLIAPLLA IFAKSYGLSN FQIGLIFGSF ALVRTIFQLP 
AGTLSDTYGK KIFLVAGTLL YGVTTLFYGL VSGFASMLIV RTFTGVFSAF VNPVAGSYIA
QVSPKSKLGE YMGVFNSAVS LGFGVGPLLG GLLADMYGIM VPFYVCGILG IIASIIAYYK
LEDISKSQEK QKLSGKKLFS LEFLKMRNFS AAFIINIAIT ISRGALLAYL AIYAYDYGVS
AFKIGIMLAA MNMVLAVTQK KFGKIFDKNG NRIILNGIII GNLGMYILAM STSFTSMFFS
LIIASIGASM STPGINSIAI RDIPHERKGE AMGLYTASIN VGIFVGAVLL GYISDIVGIS
NMFKIGAVFS FLISYIAYVL IKNKK