Gene MmarC7_1070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1070 
Symbol 
ID5329077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1040246 
End bp1041337 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content33% 
IMG OID640793617 
Productputative DNA primase, small subunit 
Protein accessionYP_001330287 
Protein GI150402993 
COG category[L] Replication, recombination and repair 
COG ID[COG1467] Eukaryotic-type DNA primase, catalytic (small) subunit 
TIGRFAM ID[TIGR00335] DNA primase, eukaryotic-type, small subunit, putative 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATA ATCCTGCCGA TAATAAGGTT TTTAACGAAG TTTCTAGTCT TTACAAACAA 
TACTTCGACT ATGCCATAAA CGTGAGAAAG TGGCTTGAAA TTCCGGATGA TTTACCACAT
CGAGAGATTG GTTACGGGAT GTTAAAAAAA GTGGACAATA GAAACATGTC TTTTAATACT
AACGGTGAGT ATCTAGCCTG GGTTTTAAAA GAATCCCCAT TTCACCTGTA TAAATCACTT
TCATACATGG AATATCCAGA TGTAGTAGGT GGGGCTGCAA AAAAAGGTTT AATTAAAAGA
GAAGTTGCGT TCGACATAGA TACGCATAAG ACTGAAAAGT GCACTCATGA CGATTCATGG
ATATGTGAAG AATGTCTGGG TGAAGCTAGA AATCAGGTCT TAATTTTAAT CGAAGACTTC
TTGTTTCCCG ATTTTGGACT CTCTGAAAAA GATTTAAAAA TAGTATTTAC TGGAAACAGA
GGGTACCACA TATATTTAAA ACCGGAAGAT ACGAAAAAGA TTGGAGATAC AAAATTGCTT
GAAAAAATAG AAAAATGGGA AAAAAACGAA AGGAGGTACT TTATTGAATA CATTTTAGGA
AAAAATCTAA ATTTAAGGAA TATGGGAAGC CGCTGGAAAA ATATACTGAT AAGAGAATTT
AAGAAAAACA AAATTTCGAC GAAAAAGTTT GAAAAAACTT CAGACTGGAA AACTGAAATT
GATACAAGAA AGGATAACGT TAGACGCGAA ATCTACGAAA CAATTGGTAA AGTAAAAAGC
AGACTTGAAC TCGACGAAAA AGTTATGGAT GACGATATCA GACTTCTTAG AACGATCGGA
TCACTTCATG GTTATACTGG GCTGATGGTA AAAGAGATAA CATACAGTTC ATTGAAAAGT
AACCAGTTTG ACCCATTAAA TCATGGCGTA TTTTCTAAAT TCCATAAAAT AATGTACAAT
GTAAATATAA AACAGGAAAT CGATCCACTA ACTCTAAAAG GAGATACTTT CGACCATAAA
TCTACAGAAA TTCCTGCAAG CTACCTTTTA TTTTTATTTG GACATGGTAT CGACTTTGAA
ATTTTAGAAT AA
 
Protein sequence
MTDNPADNKV FNEVSSLYKQ YFDYAINVRK WLEIPDDLPH REIGYGMLKK VDNRNMSFNT 
NGEYLAWVLK ESPFHLYKSL SYMEYPDVVG GAAKKGLIKR EVAFDIDTHK TEKCTHDDSW
ICEECLGEAR NQVLILIEDF LFPDFGLSEK DLKIVFTGNR GYHIYLKPED TKKIGDTKLL
EKIEKWEKNE RRYFIEYILG KNLNLRNMGS RWKNILIREF KKNKISTKKF EKTSDWKTEI
DTRKDNVRRE IYETIGKVKS RLELDEKVMD DDIRLLRTIG SLHGYTGLMV KEITYSSLKS
NQFDPLNHGV FSKFHKIMYN VNIKQEIDPL TLKGDTFDHK STEIPASYLL FLFGHGIDFE
ILE