Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_1037 |
Symbol | |
ID | 5328875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 1012696 |
End bp | 1014354 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640793582 |
Product | type II secretion system protein E |
Protein accession | YP_001330254 |
Protein GI | 150402960 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0840117 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCTTT TTGACAGAAT TCAGACTAAA GATTCCAAAC CCGCCATCGC TAAAAAAACT AATGTTTCTG AAAATGTGTC TAAACCCTCA AATCTATTTG ATAAATCTGA AGATATCGAA AAAGAAAAAC CAGAGATTAA AGTTGGATTT TCAGTAACTG ATAAGGTAAA AAAACAGCCT GTTGAAAATT TTAATAGGGA CTCTAAGGGA TCCATAATTG ATAAATACTT TGTAAAAGTT GATGATATCG ATTTTGATGT GATTATCGAA AAAGAAGATG GAATTACGAA ATACAAAATC CCGGAAATCA CCCTAATGAA CACAGCGCTT GCAAAACTTT CAGATTTAGA TATTAAAACA ATAAAAGCGG AACTTTCAGA ATCAACCCTT CAAAAATTAG GTCAGATTCA AGGGTATCTT AAAAACTATT CGGACAAAAA TAACTTACAC TTAAGAGATA TTGAAATACT CCACTTATCG CATTATTTTT ATTTAATAAT TGGAAAATTA GGACTTTTAG AAATTCCATT GAATGACGGT AACTTGGAAG AAGTAATGGT AAATGGGATT GAATTACCTG TATTTGTATT CCACAGAAAA TATCAGATGT GTGAAACGAA TATTCGACTT GATAGGCATG AAGCGACAAG GGTTGTTGAA AGTATTGCAT ATCTTGCAGG AAGAAGTATT GATTCGAGAA CTCCAATGCT AGATGCATTT TTACCTGATG GAAGCAGGGT TAATGCCACC ATGGGTGATG TTACTTTAAG AGGAAATACC ATTACAATCC GTAAATTCAG TGAAGACCCG TTAACCATTG TTGATTTGAT TAATTATGGA ACTTTCGATC TAGAACTTGC CGCATTTCTT TGGCAGGCTG TCGAAGGATA CTTTGGTGCA AAACCTGCAA ACACCCTTAT TGTTGGGGGA ACGGGTTCGG GTAAAACAAC GACTTTAAAC GTAGTTTCTA TGTTTTCAAT GTATACTGAC AGGATTGTAA CTATCGAAGA TACTCCAGAG TTGCAGGTTC CACTAACACA CCTGATAAAA ATGATTACAA GACCGGGAAG GCCAGGAGTT CAGGGTTATG AAATCACGAT GGATGATTTA ATTAAGAACT CTTTAAGGAT GAGACCAGAT AGGATCTTTG TAGGGGAAGT TAGGGGTAGT GAAGCCCATT CATTACTTGT TGCAATGAAC ACAGGACACG ATGGATGTTC TGGAACTCTG CACGCAAACA GCGCTGATGA AGCAATTATA AGGTTAGTAA ACCCTCCAAT GAACGTTCCA AAAGTTATGA TGTCGTCTAT TGATTTTATC ATAAACCAGC AGCGTATCAA ACGTAATAAA AAAACTGTTA GAAGGATCCT CGGTGTTGTC GAAATCGGTG GAAGCGGGGA AAATATTACA AAAACCGAAC TTTTCAAATA CGATGGTATA AGCGACAGTG TTGTAAAAAC GGGAATCTGT ATGTGGGAAG AAGATGCTTG CCAGATTGCA GGTATTACTC GAGACGAATT AATGGACGAT AGAATCAATA GAAAGAAAGT ACTAAAATAT ATGGTGAACA ATAATATTAG TGATATTAGA AAAGTTGGCG ACATAATTAA ACAATATCAG GAAAATCCAG AAAATGTTTT AAAACATATA CTGGAATGA
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Protein sequence | MGLFDRIQTK DSKPAIAKKT NVSENVSKPS NLFDKSEDIE KEKPEIKVGF SVTDKVKKQP VENFNRDSKG SIIDKYFVKV DDIDFDVIIE KEDGITKYKI PEITLMNTAL AKLSDLDIKT IKAELSESTL QKLGQIQGYL KNYSDKNNLH LRDIEILHLS HYFYLIIGKL GLLEIPLNDG NLEEVMVNGI ELPVFVFHRK YQMCETNIRL DRHEATRVVE SIAYLAGRSI DSRTPMLDAF LPDGSRVNAT MGDVTLRGNT ITIRKFSEDP LTIVDLINYG TFDLELAAFL WQAVEGYFGA KPANTLIVGG TGSGKTTTLN VVSMFSMYTD RIVTIEDTPE LQVPLTHLIK MITRPGRPGV QGYEITMDDL IKNSLRMRPD RIFVGEVRGS EAHSLLVAMN TGHDGCSGTL HANSADEAII RLVNPPMNVP KVMMSSIDFI INQQRIKRNK KTVRRILGVV EIGGSGENIT KTELFKYDGI SDSVVKTGIC MWEEDACQIA GITRDELMDD RINRKKVLKY MVNNNISDIR KVGDIIKQYQ ENPENVLKHI LE
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