| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1031 |
|---|
| Symbol | |
|---|
| ID | 5329167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 1007547 |
|---|
| End bp | 1008494 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640793577 |
|---|
| Product | GTP cyclohydrolase |
|---|
| Protein accession | YP_001330249 |
|---|
| Protein GI | 150402955 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1469] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00294] conserved hypothetical protein TIGR00294 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.59743 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00756508 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAATGCA ATGACGTTCA GGCAACAGAA CCTGATATTA AGGTTTCATT AACGAGGGTT
GGGGTAACAA ACCTAAAAAA ACTCGTAAAA TTAAAAAGAA CCAATAAAAG AGATATAGTT
CTTCTCCCAA CTTTTGAAGT TTTTGTGGAT CTTCCAAGTT CACAAAAAGG GATTCACATG
TCAAGAAGCC CTGAGGTAAT TGAGGAAGTG GTTGAAAACA TACTTTTGGA AAAGGAAATC
TATGGTGTTG AAGATTTATC TGTTGAAATA GTTATGAAAC TATTTGAAAA ACACGAATAC
GCAACAAGAG CAGAAGTAAT GCTTTACAGC GATTACATGA TGGAAGAAAC ATCCCCTGTA
ACTCAGAAAG ATTCTCAAGA GATTGCAAAG ATCATGGCAA GAGCATATGG TGTAAAAGAC
GACTGTGGAA AAATACATGT AAAAAAAATG GTTGGTGCAG AGGTAGTTGG AATTACAGCC
TGTCCTTGTG CACAAAACAT GCTAAAAGAA AATGCAGTAA CTAGCTTAAA AGAAAAAGGA
TTTTCAAGTG AAGATATTGA AAAAATCCTT GATTCAGTTA CTATTGCAAC ACACAATCAA
AGGGGAATTG GAACTGTTAT GATAGAGGTT CCAAGTGGAT ATACGGTTGG AATTTCAAAA
ATAATCAAGA TAATCAAGGA TTCAATGAGT GGGGAAGTTT ACGAGCTTTT GAAAAGAAGT
GACGAAGCTT ACGTTGTAGA AATGGCCCAT AAAAATCCAA AATTCGTTGA AGACTGTGCA
AGAGAAATGA TAAAAAGAGT AGTTGATGTC TTTGATTATC TACCTGAAGA CACGCAAGTT
CTTGTAAGGC AGGTAAATAA AGAAAGTATT CACAGACATG ACGCTTTTGC TGAGAGAAAT
TCTACAATAA GGGAATTAAG AGACGAACTT AAAACTTTAA CAAATTAA
|
|---|
| Protein sequence | MQCNDVQATE PDIKVSLTRV GVTNLKKLVK LKRTNKRDIV LLPTFEVFVD LPSSQKGIHM
SRSPEVIEEV VENILLEKEI YGVEDLSVEI VMKLFEKHEY ATRAEVMLYS DYMMEETSPV
TQKDSQEIAK IMARAYGVKD DCGKIHVKKM VGAEVVGITA CPCAQNMLKE NAVTSLKEKG
FSSEDIEKIL DSVTIATHNQ RGIGTVMIEV PSGYTVGISK IIKIIKDSMS GEVYELLKRS
DEAYVVEMAH KNPKFVEDCA REMIKRVVDV FDYLPEDTQV LVRQVNKESI HRHDAFAERN
STIRELRDEL KTLTN
|
|---|
| |