Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_1029 |
Symbol | |
ID | 5328746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 1005172 |
End bp | 1005690 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 24% |
IMG OID | 640793575 |
Product | transcription regulator ArsR |
Protein accession | YP_001330247 |
Protein GI | 150402953 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.140635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00225669 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGGAAAGTA TTTTAAAAAA AGTAGTAAAA ACTGAAGAAA GAAAAAATAT ACTAACTAAA CTTTTAAAAG GACCGTGTTG TTGTGAAGAT CTTTCAAAAG AATTAAATAT ATCAAAAGGA CTCCCCCCTA GATTTTTAAA ATTGTGTGCT TCATTAAATA TTGTTAAAAG AGAAAGAATC AGCCACAAAG TGTATTATTC AATAAATCCT GAAAATTATC TAAAAATATA TAACGCAATA TCTCTTGAAA ACAAAAAAAC TGAAGAAAAA AAGAATTTTA AACATAATAT AAAGAAAGAT GAATTTCAAA CTACACTTTC TGTTGGGGAT TCAAAAAATT ATGAAATTAA TAAAATAGAT AATGGATTTG GCGGAACTAC TTTTATTTTA AATAATAACG ATACGTCATA TGAGATCTTT AAAACAAATG ATAATAATTA CTGGTGTGTA TCCTGCCAAA GTGTTGATTG TGAACATATT TTGTATTTAA AAAAAGCTTC TTCTAAAAAA CGTATTTAA
|
Protein sequence | MESILKKVVK TEERKNILTK LLKGPCCCED LSKELNISKG LPPRFLKLCA SLNIVKRERI SHKVYYSINP ENYLKIYNAI SLENKKTEEK KNFKHNIKKD EFQTTLSVGD SKNYEINKID NGFGGTTFIL NNNDTSYEIF KTNDNNYWCV SCQSVDCEHI LYLKKASSKK RI
|
| |