Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0948 |
Symbol | |
ID | 5328108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | + |
Start bp | 909525 |
End bp | 911165 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640793484 |
Product | type II secretion system protein E |
Protein accession | YP_001330166 |
Protein GI | 150402872 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATG ATTTCAAAAC TGCACAAGTA AACAATCCCC ATTTGAAAAA TTACGTTGAA AAATTTAAAA AAACGTACAT GAAAATTCCC GAATTTGTTC CAAGCCTTTC AAGGGATTTT AAAGAAATAA GGTATCCGAA TATCATTTAT CCAATAGGGG ATCCCATATT CATCCACCTT TATGGAACTC CGAATTTAAA AACAAGATAT ATCGCAATAG AACCTAAATT AGGCGGTTCG GATGAAAGAA AAAAATATTT TGAAATCCTC GATAAAATTT TAGAATACGC ACCATACAGC GATACTCCTG AAAATGACGA AGAGTTTGGA AAAGTAGTTA CAAAGCTATT CGATATGGTT ACAAAAGTAT CAACTCAAAA AAATGAAAAG AAAAAAGGCC TGTTAACAAA ATTAACAGAT TCTGGAAAAA TAAATGTATC AAAACCAGAA AGGGAAAAAT TCCTCTATTT ACTGAAAAGA GATTTAATTG GACTTGGAAC TCTTGAACCA ATAAAAAGAG ACCCATATAT TGAAGATATT CACGTAATCG GTGCTAAAAA CTGTCAGCTA GTTCACAAAA TCTACGACAT GCTTCCATCA AATATTGAAT GGGAAGATGA AGGAGATATT TCAAATTACT TGAAAAACAT GTGTGAAAGA ATTGGAAGGC CAGTTTCTGA TGCTACACCA ATCGTAGATG GTTCATTACC AGATGGATCA AGGATAAACA TTCTCTATTC AGGAGATGTT TCATTAAAAG GTCCTTCATT TACAATTCGT AAATTTACAG ATGTTCCAAT AAGTATAACT CAGATCATCA GTTGGGGTAC GATGTCCGCA CAGACTGCTG CTTATTTATG GCTCTGTCTT GAATACGGGA TGAGTATATT TATCTGTGGG GAAACTGCAT CTGGAAAAAC TACCTCATTA AACGCAATAC TTCCATTCAT CAAACCTAAA TCAAAAATAT TCTCATGTGA AGATACTTCC GAAGTAAAAC CCCCAAACCC AGTTTGGCAG CAGTTGTTAA CTAGAGAAAG AGGCCCTGAG GAAAGTAGGG TTACACTATT CGATCTTTTA AGGGCTGCAT TGAGGTCTAG ACCAAACTAC ATTATTGTAG GGGAAATCAG GTCTGTAGAA GGGGCTGTTG CATTCCAAGC AATGCAAACA GGGCACCCCG TAATTTCAAC ATTCCACGCT GCAAACGTTA GAAAAATGAT TCAAAGGCTT ACAGGGGATC CGATAAATAT CCCTCAGACA TTTATGGATA ACTTAAACGT CTGTCTGTTC CAGCTTGCGG TTTATGCTAG AGGAAAATTC TTAAGACGAG TTGTTTCAGT TGAAGAAATC GAAGGATACT ACAAAGAAGT TGACGGGGTT ATCACCAGAG GTGTTTTTGA ATGGGACCCC CAAAAAGACG TTCACAACTT CACAGGTTTA AATAACAGCT ATATTCTCGA AGATAAAATC GCAACTGTTG CAGGATACGA AGATCCGAGA GAAATTTACG ATGAACTTGA TTTAAGAGTT AGAATTCTTG AAGAAATGAT TGCAAGAGGA ATCTTTGGAT ACTACGAGGT TTTGGATATT ATCTGGAGTT TCTATGAAAA AGGATTGGAA GGACTGCCAT TCCAAGTTTA A
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Protein sequence | MADDFKTAQV NNPHLKNYVE KFKKTYMKIP EFVPSLSRDF KEIRYPNIIY PIGDPIFIHL YGTPNLKTRY IAIEPKLGGS DERKKYFEIL DKILEYAPYS DTPENDEEFG KVVTKLFDMV TKVSTQKNEK KKGLLTKLTD SGKINVSKPE REKFLYLLKR DLIGLGTLEP IKRDPYIEDI HVIGAKNCQL VHKIYDMLPS NIEWEDEGDI SNYLKNMCER IGRPVSDATP IVDGSLPDGS RINILYSGDV SLKGPSFTIR KFTDVPISIT QIISWGTMSA QTAAYLWLCL EYGMSIFICG ETASGKTTSL NAILPFIKPK SKIFSCEDTS EVKPPNPVWQ QLLTRERGPE ESRVTLFDLL RAALRSRPNY IIVGEIRSVE GAVAFQAMQT GHPVISTFHA ANVRKMIQRL TGDPINIPQT FMDNLNVCLF QLAVYARGKF LRRVVSVEEI EGYYKEVDGV ITRGVFEWDP QKDVHNFTGL NNSYILEDKI ATVAGYEDPR EIYDELDLRV RILEEMIARG IFGYYEVLDI IWSFYEKGLE GLPFQV
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