| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0862 |
|---|
| Symbol | hisS |
|---|
| ID | 5329373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 831179 |
|---|
| End bp | 832435 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640793392 |
|---|
| Product | histidyl-tRNA synthetase |
|---|
| Protein accession | YP_001330080 |
|---|
| Protein GI | 150402786 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0124] Histidyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase
[TIGR00443] ATP phosphoribosyltransferase, regulatory subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.393397 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0052458 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATCATGT TTCAAAAACC TAAAGGTACA CGGGATTTTT TACCTGAAGA AATGAAAAAA
AGGAAAGTAA TCGAAAAAAA ACTTAGAAAA GTTTTTGACA GTTATAATTT TTCTGAAATA
AACACGCCTA CATTCGAAAG CTTTGAATTA CTCTCTAAAA AAACAGGAGA CGAAATCAGA
ACACAGCTTT TTGTTTTTAA AGACCATGGA GACAGAGAAA TGGGTTTAAG ACCTGAATTG
ACGTCTTCAG TTGCAAGGTT CTACATAAAC GAGTTTAAAA ATACTCCAAA ACCAGTTAAA
CTCTACTACT TTACAAACTG TTTCAGGTAT GAAAACCCGC AGGCTGGAAG GTACAGGGAA
TTCTGGCAGA TGGGCTCTGA ACTTATTGGA AGTAATAAAC CTATTGCAGA TGCAGAAGTT
ATAAACATGG CAATAGAAGG TTTAAAAGAA ATTAACATGG ATTTTGAAAT AAACATTGGA
CACCTCGGTG TTTTAAAAGG TGTTTTTGAA AAATACGATC TTTCAGACGA TGAAGGAAAT
GAAATAAGAC GTCTTATCGA TAAAGAAGAT ATGGATGGAT TAAAATCAGC TTTAAACAGA
ATAGAATCCG AAAAAAATAT TGAAATTTCA GAAAAAGTAT TTGAAGTTCT CGATTTAAAA
GGCGGAAGAG AAGTAATTTC CAAATTAAAA GAAAAATTAG CTGAATTTGA AAGTTCAATA
GCTGCTTTAG AAAATCTTGA CAGCATTCTT GAATTTGTGC CTCACGAATA CATTATAAAC
TTCGGAATTG CAAGGGGACT TGACTACTAT ACCGGAATGG TCTTTGAAAT TTACGGAAAA
AGAGAAGGTG CAAGACAGGT ATGCGGTGGT GGAAGGTACG ATAATTTAAT CGAGCTCTTC
GAGGGTGAAC CAAGCCCTGC TGTTGGTTTT GCTTACGGTT TTGACAGAAT AATGTTAAAT
ATCGATGATT TTGAAGTTGA AGAAGAATCA ATATTTGTAG TTCCGGTTAA AAGTAGCGAT
ATGCTTCTTA ATGAGTGTTT GAAAATTGCA AAAACATTAA GGGAAGCTGG AAAAGCAGTA
GAATTAGATT TAATGGGCAG AAAATTAAAT AAAGCATTAA ATTATGCGAA TACAAAGGGC
ATTAAAAAAG TAATAATTGT TGGCGAAAAT GATATTTTGG AAGGAAAAGT CGCTTTGAAA
AATATGGAAA CTGGAGAACA GTCTTTAATT GAATTAAAAG ATATTTTAAC TATCTAA
|
|---|
| Protein sequence | MIMFQKPKGT RDFLPEEMKK RKVIEKKLRK VFDSYNFSEI NTPTFESFEL LSKKTGDEIR
TQLFVFKDHG DREMGLRPEL TSSVARFYIN EFKNTPKPVK LYYFTNCFRY ENPQAGRYRE
FWQMGSELIG SNKPIADAEV INMAIEGLKE INMDFEINIG HLGVLKGVFE KYDLSDDEGN
EIRRLIDKED MDGLKSALNR IESEKNIEIS EKVFEVLDLK GGREVISKLK EKLAEFESSI
AALENLDSIL EFVPHEYIIN FGIARGLDYY TGMVFEIYGK REGARQVCGG GRYDNLIELF
EGEPSPAVGF AYGFDRIMLN IDDFEVEEES IFVVPVKSSD MLLNECLKIA KTLREAGKAV
ELDLMGRKLN KALNYANTKG IKKVIIVGEN DILEGKVALK NMETGEQSLI ELKDILTI
|
|---|
| |