Gene MmarC7_0835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0835 
Symbol 
ID5328339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp806848 
End bp808419 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content37% 
IMG OID640793365 
ProductD-3-phosphoglycerate dehydrogenase 
Protein accessionYP_001330053 
Protein GI150402759 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID[TIGR01327] D-3-phosphoglycerate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAG TACTTATAAC AGACCCGCTT CACGAGAGTG CCGTTGAGAT TTTAAAACAG 
GCAGGCGAGG TCGAAGTAGC AACCGGGTTA ACAGTTGAAG AGATAAAATT AAAAATTAAA
GATGCAGATG CTCTGGTAGT TAGAAGTGGA ACAACCGTTA CAAGAGAAAT TATCGAAGCA
TCAGAAAATT TAAAAGTCAT TGCAAGAGCT GGGGTTGGTG TAGATAACGT TGATTTGGAT
GCTGCAACTG AAAAAGGAGT AGTTGTGGTA AACGCACCAG ATGCATCATC AATATCAGTT
GCAGAGCTTT TATTTGGTAT GATGCTTTCA GCAGCAAGAA ACATCCCTCA GGCTACTGCA
TCAATTAAAA AAGGCGAATG GGACAGGAAA TCATTTAAAG GTATGGAAAT TTACGGAAAA
ACGCTTGGTA TTGTTGGACT TGGAAGAATT GGACAGCAAG TTGCAAAAAG AGCTCAAGCA
TTTGGAATGA CAATTGTTGC ATATGACCCA TATATTCCAG AAGATGTTGC ATCAGAACTT
GGAATAAAAT TGTTAACTGT AGATGAACTC TGTGCAGCAA GTGATTTTAT AACACTTCAC
GTTCCATTAA CTCCGAAAAC AAAACACATG ATTGGAAAAG ATCAGATTGC ACTCATGAAA
AGCAACATGG TTATTATGAA CTGTGCAAGA GGCGGTTTAA TTGACGAAGC TGCACTCTAT
GATGCACTTA GCAGTGGAAA AATTAAAGCA GCGGGATTGG ATGTATTTGA GCAGGAACCT
CCAAAAGACA GTCCTCTTTT AACACTCAAT AATTTAATTG GAACTCCTCA CCAGGGAGCT
TCAACAGAAG AAGCACAGTT AAGCGCAGGG ACAATTGTTG CAGAGCAAAC TGTTAAAATT
TTAAAAGGCG AATCTGCTGA AAACGTTGTA AACCTTCCAA TGGTTCCAAC CGAAAAAATG
AAAAAATTAA AACCTTACAT GATTTTAGCA GAAAAAATGG GTTCTATGGC AATACAATAC
CTTGACAATT CAATAGAACT TTTGGAAATC ACCTACATGG GCGGACTTGC AAATGAAAAG
ACCGAAATAA TTAAAAGGTC ATTTTTAAAA GGCATATTAG CACCAATATT ACTTGCAGGT
GTTAATTTAG TAAACGCTCC AGTAATTGCG AAAAGCAGAA ACATCAAAAT TGCAGAAGGC
ACAATGTCTG AAAGCGATTA TGGGAATTCA ATAAAGATTG TTGCTAAAGG ATTAAATGAT
GAAATTTCGA TAATTGGAAG CATCGAACAC AATGAAATTG TTTTCAGGGA AATCAACGGA
TACAGAATGG ATATAAAACC TGAAGGAACA ATCTGTATAA TAAAACACAT CGACAGACCG
GGAATGGTTG GAAAAGTTGG AGTACTCCTT GGTGAACACG GAATAAACAT TGCAGGAATG
CAAGTTGGAA GAAGAGAGCC TGGAGGACAC AGTATTATGT TCTTGGATGT TGACCACATG
ATTTCAGATG ATGTAATGGA AGAAATCCAG AAAATAGAAA ATGTACGGGC TGTAAAATCA
ATAAACATTT AA
 
Protein sequence
MSKVLITDPL HESAVEILKQ AGEVEVATGL TVEEIKLKIK DADALVVRSG TTVTREIIEA 
SENLKVIARA GVGVDNVDLD AATEKGVVVV NAPDASSISV AELLFGMMLS AARNIPQATA
SIKKGEWDRK SFKGMEIYGK TLGIVGLGRI GQQVAKRAQA FGMTIVAYDP YIPEDVASEL
GIKLLTVDEL CAASDFITLH VPLTPKTKHM IGKDQIALMK SNMVIMNCAR GGLIDEAALY
DALSSGKIKA AGLDVFEQEP PKDSPLLTLN NLIGTPHQGA STEEAQLSAG TIVAEQTVKI
LKGESAENVV NLPMVPTEKM KKLKPYMILA EKMGSMAIQY LDNSIELLEI TYMGGLANEK
TEIIKRSFLK GILAPILLAG VNLVNAPVIA KSRNIKIAEG TMSESDYGNS IKIVAKGLND
EISIIGSIEH NEIVFREING YRMDIKPEGT ICIIKHIDRP GMVGKVGVLL GEHGINIAGM
QVGRREPGGH SIMFLDVDHM ISDDVMEEIQ KIENVRAVKS INI