Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0771 |
Symbol | secD |
ID | 5328163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 753292 |
End bp | 754458 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640793298 |
Product | preprotein translocase subunit SecD |
Protein accession | YP_001329989 |
Protein GI | 150402695 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0342] Preprotein translocase subunit SecD |
TIGRFAM ID | [TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTGC TAAAAGACCC TAAAGTAATA ATTCTTTTAG TATGTATTTT GGCCTCCTTG CTACTTATTG CATTTAAGGG GATTTCCTTT GGTGTAGATT TAAGTGGTGG TTCTACAATA GTTTTACAGA CTGAAACTGA GCTTTCAGAA TCTGAAATGA CAACTGTAAA TGAAATATTA ACAAGTAGGC TTAATACAAA TGGACTTAGT GACGTTAGAA TTTACCCTAG GGGAAGTGAC GAGGTAGTTA TTGAAATACC CGAAAGTGCG GATTTAGACA GAATAAAAAA GATTTTAACG CAACAAGGGG TATTTACTGC AATAATTGAT AACCAGACTG CATACACAGG GCAAGATATA TCTTATGTTG AAGAACCTGG AACAACTGCT TCAGGTTACG GGGTAGGATT TAAATTAACT CTTGACGGGG CACAAAACTT TGCAGATGTT GCTTACGGAA AAGGAGGATA TCCTGTAGAA CTCTACATGG ATGATAATTT AATAAGTTCC CCGATTCTTT CAGCAGACCT TGCAGATGGA AATATACACC AAAGTCAAGT AATAACTGTT GCAGGATCAA ATCCAACTGA AGATGATATC GATGAAGCTT GGGTTATTTA CACAGCTTTA CAATCAGGTT CACTTCCTGT AAAAGTACAG ATTGAATACA TCAGTTCGGT ATCCCCTACT TTGGGATCAG AATTTATAAA AGGATCAGTA ATTGCAGGAT TGTTTGCATT CATTGCAGTT GCAGCAGTTA TTTCATTTAG ATATAAAAAT CCAAAGATAG TTCTTCCAAT CCTTATAACT GGATTTTCAG AAGTGCTTTT AATCTTGGGT TTTGCATCAC TCATCAGCTG GAAACTTGAC CTTGCATCAA TTGCAGGAAT TATTGCAGCA GTGGGAACGG GTGTTGATCA CCAAATAGTT ATCACCGATG AAACAATTGC TGGTGAAGCT AAAAAAGTAA CCAAAAGTAT TAAAAGGGCG TTCTTCATTA TATTCGGTGC AGCGGCTACA ACAATTGCGG CAATGCTTCC ATTGTTTGTG ATGGGTATTG GAATGCTCAA AGGATTTGCA ATAACCACTA TCGCAGGTGT TTTAATGGGA ATTTCAATTT CAAGACCTGC ATTTTCGAGA ATAATACAAT ACGTATTAAA GAATTAA
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Protein sequence | MKLLKDPKVI ILLVCILASL LLIAFKGISF GVDLSGGSTI VLQTETELSE SEMTTVNEIL TSRLNTNGLS DVRIYPRGSD EVVIEIPESA DLDRIKKILT QQGVFTAIID NQTAYTGQDI SYVEEPGTTA SGYGVGFKLT LDGAQNFADV AYGKGGYPVE LYMDDNLISS PILSADLADG NIHQSQVITV AGSNPTEDDI DEAWVIYTAL QSGSLPVKVQ IEYISSVSPT LGSEFIKGSV IAGLFAFIAV AAVISFRYKN PKIVLPILIT GFSEVLLILG FASLISWKLD LASIAGIIAA VGTGVDHQIV ITDETIAGEA KKVTKSIKRA FFIIFGAAAT TIAAMLPLFV MGIGMLKGFA ITTIAGVLMG ISISRPAFSR IIQYVLKN
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