| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0743 |
|---|
| Symbol | |
|---|
| ID | 5328872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 728428 |
|---|
| End bp | 728940 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640793269 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001329961 |
|---|
| Protein GI | 150402667 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4800] Predicted transcriptional regulator with an HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.81664 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGCGC ATGAACGACT TTTATTGAGT GTGGGTTCAG ATAAGTTTAC GGATGAATTT
AAAAAGGTTC TTCTTGAACT GGATGTTCCA TTAAAGGAAT TTTCTGAAAT ATCTGATATA
CCTTACAGTA CACTTTATAA AATCACGAAT GAAAAGGATT TTCGAGTATC AACTCTTAAA
AAAATTATAA ATACTGTAAA AAGCTTTGAA GAAGAAGATT CTTCGGAAGA TAAAATAGCC
CTGATTGCAG CAAGGCCATC ACTTAATAAA ATAAGCACAA AAAGGATAGC AGTAAATGGA
AAAACCTATC TTTTAAAAGA ATACCCTGCA AGCACGCTCG AAGAATGTAT AGTTTCGGCA
ATATATGCAG AAAGAGAGGG TGTAAAAGCA ATAGTTTGTG CCCCAATTGT AAGTACGAGC
ATTGAAAAGG TTGTAAGAAT TCCGGTTGCA GTTATCATTG CAGAAAAAAA TGCATTTATG
GAAGCGCTAG AAATTGTTGT GTCAAAGATT TAA
|
|---|
| Protein sequence | MRAHERLLLS VGSDKFTDEF KKVLLELDVP LKEFSEISDI PYSTLYKITN EKDFRVSTLK
KIINTVKSFE EEDSSEDKIA LIAARPSLNK ISTKRIAVNG KTYLLKEYPA STLEECIVSA
IYAEREGVKA IVCAPIVSTS IEKVVRIPVA VIIAEKNAFM EALEIVVSKI
|
|---|
| |