Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0472 |
Symbol | |
ID | 5329432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 483635 |
End bp | 484792 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640792993 |
Product | geranylgeranyl reductase |
Protein accession | YP_001329692 |
Protein GI | 150402398 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.730289 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATTTTG AAAAGTACGA TGTCGTAATT GTTGGTGGTG GGCCTTCTGG ATTTATTACT GGGGAAAATA TTAAAAATAG AAAAGTTCTC GTTTTGGAAG AACATCAGGA AATTGGAGTT CCACTCCAGT GTGCAGGGCT TTTGAGTAAA AATTGTATAA AAGAACTTGG AAATCCAAAG GGTTCAGTAA ATAAAGTTAG GGGAGCGCAT ATTTATTCAA AAAACAGCTC TATTACTGTT GGAAATGAAG AGATTCGTGC AGAAGTCTTC GAACGAAAAG TAATGGATAA AGATATTGCA GTAAGGGCAT CTAAAAATGT GGATGTACTG TTAAAATCAT ACGGGAAAAT TAAAAATTCA AATTTACCCT CCGATCGAGA TAACAACAGG CATAAATTGC AAATAATGCA CATGGACGAA ATTTTCGAGG TTTCTCCTGA GATAATTATC GGAGCTGATG GGATAAGGTC AACAATTGGA AGATCATTGA ATATGCTTGA TAAAAAAAGG GAAATAATTT CGGGAGTTCA GATTGAATTT GTAAATGCGA AAATTGATGA TGATTTTGTT TACGTAATTT ATGATAAAAG GTATTCTGAA AAGTTTTTCA CGTGGTTAAT TCCGCTTGGA AACGATAGGG TTAGGGTTGG AATGTGTGAT TCAACTAATT CTTACAAAAA ATTGCTGGAT TTTATAGAAA ATAACCAGAT TGCAAAAGAA ATTTTGAAAA ATGCAACTCC GGTTGAATTT ATCTGTGGTG CGATTCCAAT CGGTTATTCA AAAACAGTAA AAAATAACGT AATGCTTGTT GGAGATTCCG CAGGCCAGGT AAAGCCATTA AGTGGGGGTG GACTTTACTA TGGTGCAAAA TGTGGAAAAA TCTGTGCAGA TACAATAAAT CATTATTTTG AAGGAAATTA CAATGTTGAA TTTTTAAAAA ATTATGAAAA AAACTGGAAA CGCGAAATTT CATCTGAAAT TGATAAGAAT ATCAAAATTA GAAAAATATT AAACATGTTA AATAACGATA AAATGGACAG GATTTTTGAT TTTATTAATA AAAATAACCT TGTAGAATTT ATAAATGAAA AAGGAGATAT GGATAACCCA TCAACAGTTG TTAGGCCGAT TTTGGATCGA GTTATCTTTG GAAAATAG
|
Protein sequence | MDFEKYDVVI VGGGPSGFIT GENIKNRKVL VLEEHQEIGV PLQCAGLLSK NCIKELGNPK GSVNKVRGAH IYSKNSSITV GNEEIRAEVF ERKVMDKDIA VRASKNVDVL LKSYGKIKNS NLPSDRDNNR HKLQIMHMDE IFEVSPEIII GADGIRSTIG RSLNMLDKKR EIISGVQIEF VNAKIDDDFV YVIYDKRYSE KFFTWLIPLG NDRVRVGMCD STNSYKKLLD FIENNQIAKE ILKNATPVEF ICGAIPIGYS KTVKNNVMLV GDSAGQVKPL SGGGLYYGAK CGKICADTIN HYFEGNYNVE FLKNYEKNWK REISSEIDKN IKIRKILNML NNDKMDRIFD FINKNNLVEF INEKGDMDNP STVVRPILDR VIFGK
|
| |