Gene MmarC7_0447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0447 
Symbol 
ID5328385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp455981 
End bp457291 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content36% 
IMG OID640792968 
Productdiaminopimelate decarboxylase 
Protein accessionYP_001329667 
Protein GI150402373 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID[TIGR01048] diaminopimelate decarboxylase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.7159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTCT TGGGGAACGA AATGCTTACC GTTGAAGGTA AAAACTTAAA AATTGACGGA 
TATGATGCAA GCGAACTTGC TAAAACTTAC GGAACTCCAC TCTACGTCAT GAGTGAAACG
CAAACCGTTA AAAACTTTAC AAGATACGTT GACTCATTTA AAGAATACTC TGAAAAAACC
GGAAAAGAAT TCATAATTTC ATTTGCATAC AAAGCAAACA CGAACCTTGC TGTAACAAAA
CTCCTCTCAA AACTCGGATG TGGTGCAGAT ATCGTGAGTG CAGGGGAATT GTACATTGCA
AAACTTTCAA ATGTTCCTTC CGAAAAAATT GTATTTAACG GAAACTGTAA ATTAAAAGAA
GAAATTAAAA TGGGAATTGA AGCTGAAATA AGAGCATTTA ACGTTGACAG CATCAGTGAA
CTTGTTTTAA TTAATGAAAC TGCAAAAGAA ATGGGAAAAA TTGCAAATGT TGCATTTAGG
GTAAATCCAA ACGTTGATGC AAAAACGCAC CCTAAAATTT CAACAGGAAT GAAAAAGAAC
AAATTCGGGC TCGACATTGA AAGCGGAATT GCACTTGAAA CTATTAAAAT GGCAGAAAAA
ATGGAAAACG TAAAAATTGT TGGAATTCAC TGCCATATTG GTTCACAACT AACTTACATC
AGCCCATTTG TTGAAGAAGC TAGGAAAATC ATGGATTTCG TAGTTTCACT CAAAAATGAA
GGAATTGAAA TAAAAGATGT AAATTTAGGT GGGGGCCTTG GAATCCCATA TGATAAAAAT
ACAAAAATCC CTGTTCAAAA AGATCTTTCA AAAGCAGTTC TCGATGTAAT TTACGAATAC
GAAGGAAAAA TCGAACTTCC AAATTTAATA TTGGAACCTG GAAGAAGTTT GGTTGCTACC
GCGGGAGTTT TACTTGGAAC TGTCGAACAC GTCAAAGAAA CACCTGTTGC AAAATGGATA
ATGATTGATG CTGGAATGAA CGACATGATG AGACCTGCAA TCTATGAGGC ATACCACGAA
ATCGTTCCTT GTACCATTAG AGACGAAAAA GAAGTTGTAA GCGTTGCAGG AGGACTTTGT
GAAAGTTCCG ATGTATTTGG AAAGGATAGG GAACTCTCAA AAATGGAAGT AAAAGATACC
GTTGCAATTT TAGACGTTGG AGCATACGGA ATCAGCATGG CAAACAACTA CAACTCAAGA
GGAAAACCTG CAATGATCCT TACAAATGAA AAGGAAGTTT CATTAATCAG AGTTAGAGAA
ACCCTTGCAG ATTTAATTTC AAAAGATATC GTACCAAACC ATCTTTTGTA A
 
Protein sequence
MEFLGNEMLT VEGKNLKIDG YDASELAKTY GTPLYVMSET QTVKNFTRYV DSFKEYSEKT 
GKEFIISFAY KANTNLAVTK LLSKLGCGAD IVSAGELYIA KLSNVPSEKI VFNGNCKLKE
EIKMGIEAEI RAFNVDSISE LVLINETAKE MGKIANVAFR VNPNVDAKTH PKISTGMKKN
KFGLDIESGI ALETIKMAEK MENVKIVGIH CHIGSQLTYI SPFVEEARKI MDFVVSLKNE
GIEIKDVNLG GGLGIPYDKN TKIPVQKDLS KAVLDVIYEY EGKIELPNLI LEPGRSLVAT
AGVLLGTVEH VKETPVAKWI MIDAGMNDMM RPAIYEAYHE IVPCTIRDEK EVVSVAGGLC
ESSDVFGKDR ELSKMEVKDT VAILDVGAYG ISMANNYNSR GKPAMILTNE KEVSLIRVRE
TLADLISKDI VPNHLL