Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0447 |
Symbol | |
ID | 5328385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | + |
Start bp | 455981 |
End bp | 457291 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640792968 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_001329667 |
Protein GI | 150402373 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.7159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTCT TGGGGAACGA AATGCTTACC GTTGAAGGTA AAAACTTAAA AATTGACGGA TATGATGCAA GCGAACTTGC TAAAACTTAC GGAACTCCAC TCTACGTCAT GAGTGAAACG CAAACCGTTA AAAACTTTAC AAGATACGTT GACTCATTTA AAGAATACTC TGAAAAAACC GGAAAAGAAT TCATAATTTC ATTTGCATAC AAAGCAAACA CGAACCTTGC TGTAACAAAA CTCCTCTCAA AACTCGGATG TGGTGCAGAT ATCGTGAGTG CAGGGGAATT GTACATTGCA AAACTTTCAA ATGTTCCTTC CGAAAAAATT GTATTTAACG GAAACTGTAA ATTAAAAGAA GAAATTAAAA TGGGAATTGA AGCTGAAATA AGAGCATTTA ACGTTGACAG CATCAGTGAA CTTGTTTTAA TTAATGAAAC TGCAAAAGAA ATGGGAAAAA TTGCAAATGT TGCATTTAGG GTAAATCCAA ACGTTGATGC AAAAACGCAC CCTAAAATTT CAACAGGAAT GAAAAAGAAC AAATTCGGGC TCGACATTGA AAGCGGAATT GCACTTGAAA CTATTAAAAT GGCAGAAAAA ATGGAAAACG TAAAAATTGT TGGAATTCAC TGCCATATTG GTTCACAACT AACTTACATC AGCCCATTTG TTGAAGAAGC TAGGAAAATC ATGGATTTCG TAGTTTCACT CAAAAATGAA GGAATTGAAA TAAAAGATGT AAATTTAGGT GGGGGCCTTG GAATCCCATA TGATAAAAAT ACAAAAATCC CTGTTCAAAA AGATCTTTCA AAAGCAGTTC TCGATGTAAT TTACGAATAC GAAGGAAAAA TCGAACTTCC AAATTTAATA TTGGAACCTG GAAGAAGTTT GGTTGCTACC GCGGGAGTTT TACTTGGAAC TGTCGAACAC GTCAAAGAAA CACCTGTTGC AAAATGGATA ATGATTGATG CTGGAATGAA CGACATGATG AGACCTGCAA TCTATGAGGC ATACCACGAA ATCGTTCCTT GTACCATTAG AGACGAAAAA GAAGTTGTAA GCGTTGCAGG AGGACTTTGT GAAAGTTCCG ATGTATTTGG AAAGGATAGG GAACTCTCAA AAATGGAAGT AAAAGATACC GTTGCAATTT TAGACGTTGG AGCATACGGA ATCAGCATGG CAAACAACTA CAACTCAAGA GGAAAACCTG CAATGATCCT TACAAATGAA AAGGAAGTTT CATTAATCAG AGTTAGAGAA ACCCTTGCAG ATTTAATTTC AAAAGATATC GTACCAAACC ATCTTTTGTA A
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Protein sequence | MEFLGNEMLT VEGKNLKIDG YDASELAKTY GTPLYVMSET QTVKNFTRYV DSFKEYSEKT GKEFIISFAY KANTNLAVTK LLSKLGCGAD IVSAGELYIA KLSNVPSEKI VFNGNCKLKE EIKMGIEAEI RAFNVDSISE LVLINETAKE MGKIANVAFR VNPNVDAKTH PKISTGMKKN KFGLDIESGI ALETIKMAEK MENVKIVGIH CHIGSQLTYI SPFVEEARKI MDFVVSLKNE GIEIKDVNLG GGLGIPYDKN TKIPVQKDLS KAVLDVIYEY EGKIELPNLI LEPGRSLVAT AGVLLGTVEH VKETPVAKWI MIDAGMNDMM RPAIYEAYHE IVPCTIRDEK EVVSVAGGLC ESSDVFGKDR ELSKMEVKDT VAILDVGAYG ISMANNYNSR GKPAMILTNE KEVSLIRVRE TLADLISKDI VPNHLL
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