Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0392 |
Symbol | |
ID | 5328210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | + |
Start bp | 401853 |
End bp | 404477 |
Gene Length | 2625 bp |
Protein Length | 874 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640792913 |
Product | ATP-dependent helicase |
Protein accession | YP_001329612 |
Protein GI | 150402318 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.447466 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAAAAATG ATGGCGAAAT ACTAGATTTA TTCGAACCTG CTGTCAAAAA ATGGTGGGTA AATAAATTTG AAGCCTATAA ATCAATTAAT AATGGATATT TTACCCCACC TCAAAGGCTC GCAATTCCAA AAATTCATTT TGGAAGAAAT ACTTTAATTT GTAGCCCTAC GGGAAGTGGA AAAACACTTA GCAGCTTTAT TGCAATTATA AACGAACTTT TTAGAATTGA AAAAGAAGAA GGGCTACAAA ACAGTATATA CTGCCTCTAC ATCAGCCCGC TAAAAAGTCT TGCAAACGAC ATTCACGTAA ATTTAGACGA ACCATTATCT GAAGTAAAAG AAATTTTAAA AGAAGAAGGT AGCGAAATTA CAGGAATTAG ACATGCGATA AGGCATGGCG ATACTTCAAA TTATGAAAAA TCAAAAATGC TAAAAAATAC GCCGCATATT TTAAATACAA CTCCGGAAAC TCTTGCAATT ATATTAAATT CCCCAAAATT TAAGGAAAAA TTAAAAACTG TTCGATGGGT AATTATCGAT GAAATCCACG CGCTTGCAGA TAACAAAAGA GGAGTTCATT TAAGTATCAG CCTTGAACGA CTTCGTGAGC TTACTAATCA GGAATTTTTA AGAATCGGGT GCAGTGCAAC TGTTGAACCT TTAGAAATGG TTGCAGAATA CCTTGGAGGG TATTATGACG ATGGGTACAA CAGACCCGTT GAAATAGTCG ATACAAGGTT TGTTAGGGGA TACGATTTAA AATTGCTGTG TCCTGTTGAG GATTTAATAA ATAGAACTCC AAAAGAAATT TCTGAAAAGC TCTACGAAAA ACTTGATAGG TTAATTCAAA CTCATGAAAA TACGCTCATA TTTACAAATA CGAGGGGTGG CGCTGAAAGA GTATTATATA ATCTTAGAAA GCGTTATCCT GGAAAATACG ATGAAACAAA CAGCGGATGC CACCACGGAA GTTTATCAAA AGAAAAAAGG CACGAACTCG AAGAAAAATT AAAAACAGGA AGCCTTAAAT TTGCCACAAC TAGCAGCAGC CTTGAACTTG GAATCGATAT GCCATATATC GACCTTGTAG TTCAGATTGG AAGTCCAAAA AGTGTTAAAA CTATGCTTCA AAGAATTGGT AGGGCAGGCC ACGGAATTGG AAAGGTTGCC AAAGGTAGAA TCATTGCACT TGACAGGGAC GAACTTTTAG AGTGCGCTGT AATGCTTAAA AAAGCAATGG ATGGTTTTAT CGATAAAGTG CACATTCCAA AAGGTCCACT TGATGTTTTG ATACAGCATA TCTATGGAAT TGCGATAAAC GGATATATCG AGCTTGAAAG AGTAAAAAAT ATCATTAGAA GAAGTTATAA CTACCACGAA ATTACCGATG AAGAGTTTGA TATTCTTTTA AACTACCTGA CTGCATCTTA TGCTGGAATG GACGAAAAAA GGATATATTC AAAAATATGG TACGATCCAG ACACAAAAAT GATTGGAAAA ACTGGAAAAA CTGCAAGAGC AATTTATTAC ATGAATATAG GCACAATTCC TGACGATTTC AGCTGTGACG TATATTTGAG GGGAACTACA GTCTGGGTTG GAAAACTCGA TGAACAGTAT TTGGACAGGC TTGAAAAGGG CGATGTATTT ACACTTGGTG GAGAACACCT TAAATTTCAG TATAGGCGTG GAAGCAAGGT TTATGTCGAT AAAACAAGTG AAAGGCCAAA TATTCCTAGC TGGTACTCTG AAAGACTGCC TTTAAGCTAC GACCTTGGTA GAAATATCCT TCTTTTTAAA AAGGAAGCTG TTTCAAAATA TAATGCAGGT AGACTCCTTG ATCTTTTAAG TGAATACCCA CTTGATTCAA ATGCTACAAA AAGTCTTTAC GGGCTTTTTA ACCAGCAGAT ATTATACAAA GGAAACGATA GCGTCAGTAC ATTAAATAAA ATGGTTGTAG AAGGCCATAT TTTTGATAAA AAAATGCATT ACTACTTCCA CAGTAATTAC GGAAGGAAAT TTAACGACGG ATTCAGCAGA GCTGTGGCTT ATGCCCTGAG TAAACAGTAC AAACTTGGAG TTTTGGTAAG TATTTCCGAT AACGGATTTT CACTTGAATT TGCGAAAAAC CAAAGAATTG ATATTGAAAG TGTGGTAAAA TCATTAACTC CTGAAAATAT AAAAGATATC TTAAAACAGG CTCTTGATGG AACAAACCTG TTAAAAAGGA TGTTTAGGAT AAATGCGACA AGAAGTCTCA TGATTTTGAG AAATTACATT GGACATAAAA AATCTGCGAA AAAACAGCAA GTAAGTGCAG ATTTGCTAAT AAATTACGCA AAAAGCCTCG ATAGATTTGC ACCCCTTGAG GAAACACTGC GAGAAATAAT TGAAGATTCA CTTGAACTTG ATAATATTCG TGAAGTTTTG GGCGAAATTA GGAGCGGAAA ATTAAAAATT AATATAATTG ATGTTCCAAT ACCTACCCCG ATGAGCTTTG GAATTGCAAC ACTTAATGCA AGCGATTCAG TTCTTGCTGA AAATAAAAAC CAGCTTTTGA AAGATTTCCA CCAAATGGTA ATCAAAATGA TTGAATACGA AAAGGGAATT TCGCTTGAGG ACTAA
|
Protein sequence | MKNDGEILDL FEPAVKKWWV NKFEAYKSIN NGYFTPPQRL AIPKIHFGRN TLICSPTGSG KTLSSFIAII NELFRIEKEE GLQNSIYCLY ISPLKSLAND IHVNLDEPLS EVKEILKEEG SEITGIRHAI RHGDTSNYEK SKMLKNTPHI LNTTPETLAI ILNSPKFKEK LKTVRWVIID EIHALADNKR GVHLSISLER LRELTNQEFL RIGCSATVEP LEMVAEYLGG YYDDGYNRPV EIVDTRFVRG YDLKLLCPVE DLINRTPKEI SEKLYEKLDR LIQTHENTLI FTNTRGGAER VLYNLRKRYP GKYDETNSGC HHGSLSKEKR HELEEKLKTG SLKFATTSSS LELGIDMPYI DLVVQIGSPK SVKTMLQRIG RAGHGIGKVA KGRIIALDRD ELLECAVMLK KAMDGFIDKV HIPKGPLDVL IQHIYGIAIN GYIELERVKN IIRRSYNYHE ITDEEFDILL NYLTASYAGM DEKRIYSKIW YDPDTKMIGK TGKTARAIYY MNIGTIPDDF SCDVYLRGTT VWVGKLDEQY LDRLEKGDVF TLGGEHLKFQ YRRGSKVYVD KTSERPNIPS WYSERLPLSY DLGRNILLFK KEAVSKYNAG RLLDLLSEYP LDSNATKSLY GLFNQQILYK GNDSVSTLNK MVVEGHIFDK KMHYYFHSNY GRKFNDGFSR AVAYALSKQY KLGVLVSISD NGFSLEFAKN QRIDIESVVK SLTPENIKDI LKQALDGTNL LKRMFRINAT RSLMILRNYI GHKKSAKKQQ VSADLLINYA KSLDRFAPLE ETLREIIEDS LELDNIREVL GEIRSGKLKI NIIDVPIPTP MSFGIATLNA SDSVLAENKN QLLKDFHQMV IKMIEYEKGI SLED
|
| |