Gene MmarC7_0392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0392 
Symbol 
ID5328210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp401853 
End bp404477 
Gene Length2625 bp 
Protein Length874 aa 
Translation table11 
GC content35% 
IMG OID640792913 
ProductATP-dependent helicase 
Protein accessionYP_001329612 
Protein GI150402318 
COG category[R] General function prediction only 
COG ID[COG1201] Lhr-like helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.447466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAATG ATGGCGAAAT ACTAGATTTA TTCGAACCTG CTGTCAAAAA ATGGTGGGTA 
AATAAATTTG AAGCCTATAA ATCAATTAAT AATGGATATT TTACCCCACC TCAAAGGCTC
GCAATTCCAA AAATTCATTT TGGAAGAAAT ACTTTAATTT GTAGCCCTAC GGGAAGTGGA
AAAACACTTA GCAGCTTTAT TGCAATTATA AACGAACTTT TTAGAATTGA AAAAGAAGAA
GGGCTACAAA ACAGTATATA CTGCCTCTAC ATCAGCCCGC TAAAAAGTCT TGCAAACGAC
ATTCACGTAA ATTTAGACGA ACCATTATCT GAAGTAAAAG AAATTTTAAA AGAAGAAGGT
AGCGAAATTA CAGGAATTAG ACATGCGATA AGGCATGGCG ATACTTCAAA TTATGAAAAA
TCAAAAATGC TAAAAAATAC GCCGCATATT TTAAATACAA CTCCGGAAAC TCTTGCAATT
ATATTAAATT CCCCAAAATT TAAGGAAAAA TTAAAAACTG TTCGATGGGT AATTATCGAT
GAAATCCACG CGCTTGCAGA TAACAAAAGA GGAGTTCATT TAAGTATCAG CCTTGAACGA
CTTCGTGAGC TTACTAATCA GGAATTTTTA AGAATCGGGT GCAGTGCAAC TGTTGAACCT
TTAGAAATGG TTGCAGAATA CCTTGGAGGG TATTATGACG ATGGGTACAA CAGACCCGTT
GAAATAGTCG ATACAAGGTT TGTTAGGGGA TACGATTTAA AATTGCTGTG TCCTGTTGAG
GATTTAATAA ATAGAACTCC AAAAGAAATT TCTGAAAAGC TCTACGAAAA ACTTGATAGG
TTAATTCAAA CTCATGAAAA TACGCTCATA TTTACAAATA CGAGGGGTGG CGCTGAAAGA
GTATTATATA ATCTTAGAAA GCGTTATCCT GGAAAATACG ATGAAACAAA CAGCGGATGC
CACCACGGAA GTTTATCAAA AGAAAAAAGG CACGAACTCG AAGAAAAATT AAAAACAGGA
AGCCTTAAAT TTGCCACAAC TAGCAGCAGC CTTGAACTTG GAATCGATAT GCCATATATC
GACCTTGTAG TTCAGATTGG AAGTCCAAAA AGTGTTAAAA CTATGCTTCA AAGAATTGGT
AGGGCAGGCC ACGGAATTGG AAAGGTTGCC AAAGGTAGAA TCATTGCACT TGACAGGGAC
GAACTTTTAG AGTGCGCTGT AATGCTTAAA AAAGCAATGG ATGGTTTTAT CGATAAAGTG
CACATTCCAA AAGGTCCACT TGATGTTTTG ATACAGCATA TCTATGGAAT TGCGATAAAC
GGATATATCG AGCTTGAAAG AGTAAAAAAT ATCATTAGAA GAAGTTATAA CTACCACGAA
ATTACCGATG AAGAGTTTGA TATTCTTTTA AACTACCTGA CTGCATCTTA TGCTGGAATG
GACGAAAAAA GGATATATTC AAAAATATGG TACGATCCAG ACACAAAAAT GATTGGAAAA
ACTGGAAAAA CTGCAAGAGC AATTTATTAC ATGAATATAG GCACAATTCC TGACGATTTC
AGCTGTGACG TATATTTGAG GGGAACTACA GTCTGGGTTG GAAAACTCGA TGAACAGTAT
TTGGACAGGC TTGAAAAGGG CGATGTATTT ACACTTGGTG GAGAACACCT TAAATTTCAG
TATAGGCGTG GAAGCAAGGT TTATGTCGAT AAAACAAGTG AAAGGCCAAA TATTCCTAGC
TGGTACTCTG AAAGACTGCC TTTAAGCTAC GACCTTGGTA GAAATATCCT TCTTTTTAAA
AAGGAAGCTG TTTCAAAATA TAATGCAGGT AGACTCCTTG ATCTTTTAAG TGAATACCCA
CTTGATTCAA ATGCTACAAA AAGTCTTTAC GGGCTTTTTA ACCAGCAGAT ATTATACAAA
GGAAACGATA GCGTCAGTAC ATTAAATAAA ATGGTTGTAG AAGGCCATAT TTTTGATAAA
AAAATGCATT ACTACTTCCA CAGTAATTAC GGAAGGAAAT TTAACGACGG ATTCAGCAGA
GCTGTGGCTT ATGCCCTGAG TAAACAGTAC AAACTTGGAG TTTTGGTAAG TATTTCCGAT
AACGGATTTT CACTTGAATT TGCGAAAAAC CAAAGAATTG ATATTGAAAG TGTGGTAAAA
TCATTAACTC CTGAAAATAT AAAAGATATC TTAAAACAGG CTCTTGATGG AACAAACCTG
TTAAAAAGGA TGTTTAGGAT AAATGCGACA AGAAGTCTCA TGATTTTGAG AAATTACATT
GGACATAAAA AATCTGCGAA AAAACAGCAA GTAAGTGCAG ATTTGCTAAT AAATTACGCA
AAAAGCCTCG ATAGATTTGC ACCCCTTGAG GAAACACTGC GAGAAATAAT TGAAGATTCA
CTTGAACTTG ATAATATTCG TGAAGTTTTG GGCGAAATTA GGAGCGGAAA ATTAAAAATT
AATATAATTG ATGTTCCAAT ACCTACCCCG ATGAGCTTTG GAATTGCAAC ACTTAATGCA
AGCGATTCAG TTCTTGCTGA AAATAAAAAC CAGCTTTTGA AAGATTTCCA CCAAATGGTA
ATCAAAATGA TTGAATACGA AAAGGGAATT TCGCTTGAGG ACTAA
 
Protein sequence
MKNDGEILDL FEPAVKKWWV NKFEAYKSIN NGYFTPPQRL AIPKIHFGRN TLICSPTGSG 
KTLSSFIAII NELFRIEKEE GLQNSIYCLY ISPLKSLAND IHVNLDEPLS EVKEILKEEG
SEITGIRHAI RHGDTSNYEK SKMLKNTPHI LNTTPETLAI ILNSPKFKEK LKTVRWVIID
EIHALADNKR GVHLSISLER LRELTNQEFL RIGCSATVEP LEMVAEYLGG YYDDGYNRPV
EIVDTRFVRG YDLKLLCPVE DLINRTPKEI SEKLYEKLDR LIQTHENTLI FTNTRGGAER
VLYNLRKRYP GKYDETNSGC HHGSLSKEKR HELEEKLKTG SLKFATTSSS LELGIDMPYI
DLVVQIGSPK SVKTMLQRIG RAGHGIGKVA KGRIIALDRD ELLECAVMLK KAMDGFIDKV
HIPKGPLDVL IQHIYGIAIN GYIELERVKN IIRRSYNYHE ITDEEFDILL NYLTASYAGM
DEKRIYSKIW YDPDTKMIGK TGKTARAIYY MNIGTIPDDF SCDVYLRGTT VWVGKLDEQY
LDRLEKGDVF TLGGEHLKFQ YRRGSKVYVD KTSERPNIPS WYSERLPLSY DLGRNILLFK
KEAVSKYNAG RLLDLLSEYP LDSNATKSLY GLFNQQILYK GNDSVSTLNK MVVEGHIFDK
KMHYYFHSNY GRKFNDGFSR AVAYALSKQY KLGVLVSISD NGFSLEFAKN QRIDIESVVK
SLTPENIKDI LKQALDGTNL LKRMFRINAT RSLMILRNYI GHKKSAKKQQ VSADLLINYA
KSLDRFAPLE ETLREIIEDS LELDNIREVL GEIRSGKLKI NIIDVPIPTP MSFGIATLNA
SDSVLAENKN QLLKDFHQMV IKMIEYEKGI SLED