Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0329 |
Symbol | |
ID | 5328824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 342071 |
End bp | 343306 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640792851 |
Product | nucleotidyl transferase |
Protein accession | YP_001329550 |
Protein GI | 150402256 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | [TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.175272 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000673657 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATGCAA TAATATTATG TGCGGGAAAA GGAACCAGAT TATATCCAAT AACAGAATCA CGTCCAAAAC CAATGATTCC AATTGCTGGA AAACCCATAT TGGAACATAT TATTGAAAAA ATCGAAAACT ACGTTGAAAA AATATATCTT GTTGTGGGTT TTGAAAAAGA AAAAATAATT GAATATTTTA AAGAAAATCC AAAAATTGAA TATATTTTGC AGGAAAAACA GCTTGGAACG GGTCATGCGG TTTTAACTGC TAAAAATTTT ATAAAAGACG ATTTTTTAGT TTTAAATGGG GACATTATCT TTGAAGATTC AATTGATGAA ATTTTAGTTT ATGAAAATGC AGTAGCGTTA TCAAAAGTAG GCCATCCCGA AAATTTTGGT GTAGTTGAAC TTGGATACGA CAATAAAATA ATAAATTTGC TTGAAAAACC AAAAAAAGAA GAATTACCCT CAAATCTTAT CAATGCGGGA ATTTACAAAC TTCAAAATAA TGTATTTGAT ATTTTAGAAA ATCTTGTTCC ATCTGAACGC GGAGAGATTG AATTAACTGA CGCTCTGAAA AAGCTAATTG AGAATGGAAA ACTTCACGGA ATTGAATTAA ATGGTTACTG GAATGATATT GGTCATCCAT GGGATGTTTT AAGTGCAAAC AACCGCTTTT TAAATAAAAT AATTTCAAAA GTTTCTGGAA AAATTGAAAA CAATGTATCA ATTACTGGAA ATGTTATAAT TGAAGAAGGG GCAGTAATAA AACCAAATTC TGTAATCGAA GGGCCAGTAA TTATAAAATC AGGTTCAATT GTCGGACCTT TAGCATATAT CCGTCCAAAT ACTGTTTTAA TGGAAAACAC CTTTGTTGGA AACTCTTCAG AAATTAAGGG AAGTATTATC CTTGAAAATA CGAAAATCCC GCATCTATCT TACGTTGGAG ATAGTATAAT TGGTGCGAAC TGTAATTTTG GCTGTAACAC GATAACTGCA AATTTGAGAT TTGATGATAA ACCTGTCATG GTAAATATCA AAGGAAAACC TGTAAAAAGT GTTAGAAAAC TTGGCGCAAT AATTGGTGAC AATGTAAAAA CTGGAATTCA AGTGTCATTC ATGCCAGGTG TTAAAATTGG CAGTAATTCT TTAATCGGTG CAAATTGCCT GATTGATAAT GATATTGAAC AGAATAGTTT CGTTTATAAA AAAGACGAGC TTGTAATTAC TAAAAAGAGG AATTAA
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Protein sequence | MDAIILCAGK GTRLYPITES RPKPMIPIAG KPILEHIIEK IENYVEKIYL VVGFEKEKII EYFKENPKIE YILQEKQLGT GHAVLTAKNF IKDDFLVLNG DIIFEDSIDE ILVYENAVAL SKVGHPENFG VVELGYDNKI INLLEKPKKE ELPSNLINAG IYKLQNNVFD ILENLVPSER GEIELTDALK KLIENGKLHG IELNGYWNDI GHPWDVLSAN NRFLNKIISK VSGKIENNVS ITGNVIIEEG AVIKPNSVIE GPVIIKSGSI VGPLAYIRPN TVLMENTFVG NSSEIKGSII LENTKIPHLS YVGDSIIGAN CNFGCNTITA NLRFDDKPVM VNIKGKPVKS VRKLGAIIGD NVKTGIQVSF MPGVKIGSNS LIGANCLIDN DIEQNSFVYK KDELVITKKR N
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