Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0281 |
Symbol | |
ID | 5329033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | + |
Start bp | 296036 |
End bp | 298078 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640792802 |
Product | hypothetical protein |
Protein accession | YP_001329502 |
Protein GI | 150402208 |
COG category | [K] Transcription |
COG ID | [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000238362 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAACAG AGATGACGAA CGTTGATATC AGTGCCGCAG TATCCGAACT TCAAAAAGTA ATCAACGGAA AATTAGACAA GGCTTTTTTA GTAAATAACC AGGATGGAAA GGAATTAATT TTAAAAGTAC ACATTCCTGA AATTGGTTCA AGAGAAATCG CAATAGGCCT TGGAAAGTAT AAATACATAA CAACTACGGA ATACGAGAGA GAAAAACCAA GAAACCCCCC TTCATTTGTA ATGTTACTTA GGAAACACTT GAAAAACATT AAAATAACGA GTGTTGCCCA GCATAACTTT GACAGAATTG TAATTTTTAA TTTTGAATGG AACGAATTAA AATATAAACT GATTATCGAG TTATTCGGGG ATGGAAATGC AATACTCCTC GATAGTGAAG ATAAAATCAT TTTGCCATTA AAAATTGAAA GGTGGAGCAC AAGAAAGATT GTTCCAAAAG AAATTTACAA GTTCCCGCCT CAAAAGGACC TCGATCCAAA AAATTTAGAG TACTCGCTTG CTAAAGAATT ATTTATCGAA GAATTCCATA AGGAAGAAAA CAAAGATACA GAAGTTGTAA GAATAATTTC AAGAATTTTT GGGCTTGCGG GAGTTTATTC AGAAGAAATT TGTTTAATTT CAGAAATAGA TAAAAATTTG AAAAATCCGA AAAACGAAGA AATTAAAAAA CTTTTCGAAG GCTCAAAATC ATTTTTTAAG AGAGCATTTA ATGAAATAAA ACCAAAATCA GTACTTAAAA ATGGGGAATT CATAGATATC GACCCAATTG ATTTAAAAAT GCATGAAAAT TTAAAAGAAA ATGAAATTAA ACATTATGAA AGTTTTTTAA CTGCACTTGA TGAATATTTC TCAAGATTTA TAATGAAAAA AGAGATTAAG CAGGCTGAAT CAAAACTACA AAAACTCGTG AAAAAACAGG AGCGTATATT AAAAAGCCAG CTTGAAACTA AAGAAAAATA CGAAAAACAA TCCATTTTAA ACCATAAACG TGGAGATTTG ATTTACGCAA ATTACTCACT AGTAGATGAA ATTGTAAGCA CAATTAAGCT TGCAAGAGAA AAAATGGACT GGAATGGAAT TAAAAATGTA ATTAAAGAAA ATAAAACTCA TCCAGTTTTA AGTAAAATAA TAAACGTGAA TGAAAAAAAT GCAGAATTAA CACTAAATCT ATCTGCTGAC TATGGAAATG GACTTATTGA AGATACAGTA CCTGTAGATT TAAGAAAAAA TGCTTTTGAA AATGCAGACA TAGTTTACCA AAAATCAAAG AAATTTAAAA ATAAAGTTCA CGGTGTAATT GAAGCTTTAA AAATTTCTGA GAAAAAACTT GCTGAATTGA AAGAAAAAGA AAAACTTGAT TCAGAAGTAC TGAAAGAAAA AGAAGAAAAT ATTAAGAAAA AGGAAAGAAA AGTCCTTAAA TGGTATGAAA AATTAAAATG GACGGTTATT GGCGGATATT TAATTGTTGC AGGAAAAGAT GCGACTACAA ACGAGATGTT GATAAAAAGA TATGTTGAAA AAAACGATAT AGTATTCCAC ACACTCATGG AAGGAGCCCC ATTTACAATT ATTAGAACAG AAGGCTCTGA AGAAATACCT GATGAAAATA TCCTGTTTGA AGTTGCAAAA TTTGCAGCAT CACACTCAAG AGCTTGGAAA CTTGGAATTG GAAGTGCAGA TGTCTACTGG GTTAGGCCAG ACCAGATTTC AAAAACCGCA GAAAGTGGGG AATTCTTAAA AAAAGGAGCT TTTGTAATTA GGGGAAAAAG AAACTTCATA AGAAGTGCTG CACTTGAACT TGGAATCGGT ATGTTAGAGT ACGATGGAAA ATTAAGAATA ACCACCGCCC CTGAAAGTGT TACAAAAGAA ACCTTTAAAA AATGGCTTTT GTTAAAACCG GGTAAATTAA AAAAGAGCGA TCTTGTAAAA GAGCTTTTAA AAGAATTTGG TGAATTCGAA GTAGATGATG AAGATATTTT AAGGGCACTT CCTCCAGGAG AGAGCGAAAT AAAACTAAAA TAA
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Protein sequence | MKTEMTNVDI SAAVSELQKV INGKLDKAFL VNNQDGKELI LKVHIPEIGS REIAIGLGKY KYITTTEYER EKPRNPPSFV MLLRKHLKNI KITSVAQHNF DRIVIFNFEW NELKYKLIIE LFGDGNAILL DSEDKIILPL KIERWSTRKI VPKEIYKFPP QKDLDPKNLE YSLAKELFIE EFHKEENKDT EVVRIISRIF GLAGVYSEEI CLISEIDKNL KNPKNEEIKK LFEGSKSFFK RAFNEIKPKS VLKNGEFIDI DPIDLKMHEN LKENEIKHYE SFLTALDEYF SRFIMKKEIK QAESKLQKLV KKQERILKSQ LETKEKYEKQ SILNHKRGDL IYANYSLVDE IVSTIKLARE KMDWNGIKNV IKENKTHPVL SKIINVNEKN AELTLNLSAD YGNGLIEDTV PVDLRKNAFE NADIVYQKSK KFKNKVHGVI EALKISEKKL AELKEKEKLD SEVLKEKEEN IKKKERKVLK WYEKLKWTVI GGYLIVAGKD ATTNEMLIKR YVEKNDIVFH TLMEGAPFTI IRTEGSEEIP DENILFEVAK FAASHSRAWK LGIGSADVYW VRPDQISKTA ESGEFLKKGA FVIRGKRNFI RSAALELGIG MLEYDGKLRI TTAPESVTKE TFKKWLLLKP GKLKKSDLVK ELLKEFGEFE VDDEDILRAL PPGESEIKLK
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