| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0252 |
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| Symbol | |
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| ID | 5329568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | - |
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| Start bp | 260994 |
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| End bp | 261890 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640792773 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001329473 |
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| Protein GI | 150402179 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.995369 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGTC AAAAAAATGT TTTAAAATTA GTTGTTGATT CAAAAATTGC TGGACACAAG
TTAATCGATG TTTTACGGAA TAATTTTGAA CTTTCCAATA AAATGATAAA AAAGTTTGAC
AAAGAAAAGA AAATTTTTGT AAATTCAAAA AATATTTCCT TAAAATCAAA ATTAAAAGAA
AATGAAACTG TTTCTGTTGA AATTGATTGT GGAATCAATA CTATTGATCC CGAAAACTTA
GCCCTAAATA TAATTTACGA AGATGACGAT TTATTGATCG TCGATAAACC AAAAAATATG
GTTGTTCACC CTACTAAAAA TGTACTATCA AAAACACTTG CAAATGCAGT TTCAAATCAC
CAGAAAATAA ATAATCAAAA CTACAAAATA AGATTTGTAA ACCGTCTTGA TATGGACACC
ACTGGACTTT TAATCATTGC AAAAGATCCA TATTCTCATC AACATCTTGC AAAACAGATG
GATGAAGGAA TTTTGGAAAA GATATATATT GCGGTAGTAA ATGGGCATCT GGATTTAAAA
GAAGGAATTA TTGAAGATTC AATCGATTTA AATGACGACG GTATAAAAAG AGAATTATCT
AATGTTGGAA AAATTTCTAA AACTAAATAC AAAGTAATCG AAGAACTCAA AAATGCATCA
ATTCTTGAAA TAAACTTACT TACCGGCAGA ACTCACCAGA TAAGGGTGCA TTTATCAAAT
ATTGGAAATC CAATAATAGG CGATGTTCTT TATGGGGAAA TTTCCGATTT AATAAATAGG
CAAGCTCTTC ATTCGCATAT TTTAAGCATT ATTCATCCAA TAACTAAAGA AAAAATGAAA
TTTTCATCAA ATCTTCCCAA AGATATCGAA AATCTTATCG AAAATTTGAA AGATTAA
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| Protein sequence | MESQKNVLKL VVDSKIAGHK LIDVLRNNFE LSNKMIKKFD KEKKIFVNSK NISLKSKLKE
NETVSVEIDC GINTIDPENL ALNIIYEDDD LLIVDKPKNM VVHPTKNVLS KTLANAVSNH
QKINNQNYKI RFVNRLDMDT TGLLIIAKDP YSHQHLAKQM DEGILEKIYI AVVNGHLDLK
EGIIEDSIDL NDDGIKRELS NVGKISKTKY KVIEELKNAS ILEINLLTGR THQIRVHLSN
IGNPIIGDVL YGEISDLINR QALHSHILSI IHPITKEKMK FSSNLPKDIE NLIENLKD
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