| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0215 |
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| Symbol | |
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| ID | 5328957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | + |
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| Start bp | 225603 |
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| End bp | 227324 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640792736 |
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| Product | DNA ligase I, ATP-dependent Dnl1 |
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| Protein accession | YP_001329436 |
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| Protein GI | 150402142 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.21738 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTTTA TTGATTTTTG TAAAATTCTT GATAAAATTG AAAAAACTAC GAAAAGGCTT
GAAAAAACAG ACTATTTTGT TGAATTAATC GATTTTATCA AAACTAATGG AAAACCTGAA
AATTTAAAAC AAGTGTCACA AATTACGATT GGAAGAGTTT TTGCAGAATT TGAAAATAAA
GAAATCGGTA TCGGACCAAA TTTATTGCTT GAAGCAGTGA AAACTACAGG AATTTCTGAA
AAAGATTTGA AATCAAAAAT AAAAGAAACT GGGGACATTG GAATTGCTGT TGAAAATTTA
AGTTCGAATA TAAAACAGGT GTCATTATTC AGCCAGGCAC TTACTCTTGA AGAAGTCTAC
TCCACATTAA AAAAACTCTC TGAAATTGAG GGAAATTCTT CCCAAAAGAA GAAAACAAGA
ATAATTTCAA ATTTACTTAT TTTAGCAACT CCCGTTGAAT CAAGGTATAT TTCAAGGCTC
ATTTTGGAAG ATATGAGGAT TGGAATGAAT ATTCCAACAA TTTTGGCCTC ATTTTCAAAT
TATTTTAATA TAAATAAAGA AACTGTTGAA AAGATATACG CAGTAACAAA CGATATCGGA
CTTTTGGGCG AAAAATTGAT TTCTGGTTCA AACATTGAAA ATGATTCGGA ATTACAGCTA
AAAGTATTCA GGCCAATAAA ACCGATGCTT GCACAGTTAA CCCCGTCAAT TGAAGCTGCA
ATAATTGAAA CTAAAATGCC CCAGTTTGAA ACTAAATACG ATGGTGCAAG AGTTCAAGTG
CATAAATCAG ACGGGAATGT AAAAATATAC AGCAGAAGGC TTGAAAATAT TACAAATTCA
GTTCCGGAAC TTGTTGAAGA AATTAAAAAA ATAGATATTG ATAACATCAT TTTAGAAGGA
GAATGTGTTG CAATGGATTT ATCTTCTGGA AAACCAAGAC CGTTTCAGGA CATTTTAAGA
AGGTTCAGGC GAAAATACGA TATAGATAAA ATGGCAGAAA AAATAGCTTT AAGAATATAT
TTTTTCGATG TTTTATACTA TGAAAAAGGT TTAATCGACA CTCCGCTAAA AGATAGAAGA
GAAATCTTAG AAAAATTATT TGGAACCAAT AACTGGGATA CGGAACTTTC AAAAATTGAA
AAAGAGATTT TTTCAAACAA AATGCTGTTT TCGTCATTTA AATTAAACAG TGATGATCCA
ATCCTTGCAA AAGAATTTTT TAACTGGAGT TTAAGTATCG GGCATGAAGG AATCATGATT
AAAAATCCAG ATGCTCCATA CACACCGGGA AGCCGTGTTA AAACAATGTA TAAAGTTAAA
CCAACACTAG AAAATCTTGA TGTGGTTGTA ACTCGTGCAA AAATTGGAAT GGGAAAAAGA
AAAGACTGGT ACGGTTCATA CGAAATTTCT GTGAAAGATT ATGAAGATAA TCTGCACGTT
ATTGGAAACG TTGGAACTGG ACTTACTGAA GACGACCTTG AAAAACTCAC AAAAATAGTT
AATGAGATAA AAATTGAAGA TTTGGGCGAA GAAGTAATTT TAGAACCTAA AATAGTACTT
GAAGTAACGT ATGAGGAAAT TCAAACTTCT GAAAAATATG AAATGGGTTA TGCCCTACGT
TTTCCAAGGG TTGTTCAGAT AAGAGAAGAC AAATCTATAA ATGACATTAA TACATTAGAT
GATGTGAAGA AAATATACGA AATAGAACGA AACAGAAAAT AA
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| Protein sequence | MLFIDFCKIL DKIEKTTKRL EKTDYFVELI DFIKTNGKPE NLKQVSQITI GRVFAEFENK
EIGIGPNLLL EAVKTTGISE KDLKSKIKET GDIGIAVENL SSNIKQVSLF SQALTLEEVY
STLKKLSEIE GNSSQKKKTR IISNLLILAT PVESRYISRL ILEDMRIGMN IPTILASFSN
YFNINKETVE KIYAVTNDIG LLGEKLISGS NIENDSELQL KVFRPIKPML AQLTPSIEAA
IIETKMPQFE TKYDGARVQV HKSDGNVKIY SRRLENITNS VPELVEEIKK IDIDNIILEG
ECVAMDLSSG KPRPFQDILR RFRRKYDIDK MAEKIALRIY FFDVLYYEKG LIDTPLKDRR
EILEKLFGTN NWDTELSKIE KEIFSNKMLF SSFKLNSDDP ILAKEFFNWS LSIGHEGIMI
KNPDAPYTPG SRVKTMYKVK PTLENLDVVV TRAKIGMGKR KDWYGSYEIS VKDYEDNLHV
IGNVGTGLTE DDLEKLTKIV NEIKIEDLGE EVILEPKIVL EVTYEEIQTS EKYEMGYALR
FPRVVQIRED KSINDINTLD DVKKIYEIER NRK
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