Gene MmarC7_0213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0213 
SymbolhisD 
ID5329062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp223848 
End bp225122 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content35% 
IMG OID640792734 
Producthistidinol dehydrogenase 
Protein accessionYP_001329434 
Protein GI150402140 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0141] Histidinol dehydrogenase 
TIGRFAM ID[TIGR00069] histidinol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.314414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGTCA AAAAAATATC CGAATTAAAC GAAAAAGACT TAGATGTCAT AATTAACAGG 
AACAAAACAA ATATTTCAGG AATTTTACCA ACGGTAAGTG AAATTTTAGA AAACGTTCAA
AAAAATGGGG ATAATGCCTT AAAAGAATAC ACTAAAAAAT TTGATGGTGT TGAAATTGAT
AATTTTAAGG TAACTTCCGA AGAAATCGAT AAAGCGTACG AAAAAATTGA TTCGAAAGTA
GTTGAATCCC TTGAAAAAGC TTATATGAAT ATCAAAGAAT TCCACGAAAT TCAGTTTAAA
AATTTAACAG AATGGGAAGT TGAAAAAAAC GGAATTAAAG CAGGACAAAT CATCAGATGT
GTTGAGAAGG CTGGATGCTA TGTTCCTGGT GGAAGGGCAT TTTATCCGTC TACCGTTTTA
ATGACGGTAA CTCCTGCAAA AGTTGCAGGT GTCAAAAAAG TTGTTGTAAC GTCTCCACCA
AACGGAACCG AAGGAAATCC CGCAACACTT GTTGCATCAG ACATTGCTAA GGCTGATGAA
ATATATAAAA TTGGTGGAGC CCAGGCTATT GGCGCTCTTG CATATGGTAC CAAATCTATT
CCAAAAGTCG ATATTATTGT TGGACCGGGA AACATCTTTG TAACTGCTGC TAAAAAATTA
GTTTACGGAG AAGTTTCAAT TGATTTTCCA GCAGGCCCTT CAGAAGTACT TATTATGTGT
GATGAATCAT CAAATGAAGA ATATGTTGCG ATGGACTTTT TAGCGCAAGC TGAACACGAT
CCCAATGCAT CATGTGTAAT AACCGTTACT TCAAAAGAAA AAGCTGAAAA AATTAAAGAA
AGAATTTTAA TGGAAATAAA AACTGCTAAA AGAACGGAAA TCATTGAAAA ATCAATTTTA
AATTCTGCAA TTGTTATTGG TTCGCTTGAT GAATGTATTG AACTTTCAAA TGCTTATGCT
CCAGAACACT TGGAAATAAT GACAAAAAAT CCAAGAGAAG TACTAAAATC AATTGAAAAT
GCTGGAAGTA TTTTTTTAGG AAACTATGCG CCAGTTCCAG TTGGAGATTA TGCAAGCGGT
ACAAACCACG TTCTTCCAAC GTCCGCATGT GCAAAAATGT ATTCTGGACT CAGCGTTGAA
ACATTTATTA AAAAACCAAC AGTTCAGGAA TTGACAAAAG AAGGTTTAAT GGAAATTGGA
AATATCGTAA CCACTCTTGC AGAAGCAGAG GGGCTATTTA ACCACTCTGA AGCGGTTAAA
AGAAGGTTAA ATTAA
 
Protein sequence
MIVKKISELN EKDLDVIINR NKTNISGILP TVSEILENVQ KNGDNALKEY TKKFDGVEID 
NFKVTSEEID KAYEKIDSKV VESLEKAYMN IKEFHEIQFK NLTEWEVEKN GIKAGQIIRC
VEKAGCYVPG GRAFYPSTVL MTVTPAKVAG VKKVVVTSPP NGTEGNPATL VASDIAKADE
IYKIGGAQAI GALAYGTKSI PKVDIIVGPG NIFVTAAKKL VYGEVSIDFP AGPSEVLIMC
DESSNEEYVA MDFLAQAEHD PNASCVITVT SKEKAEKIKE RILMEIKTAK RTEIIEKSIL
NSAIVIGSLD ECIELSNAYA PEHLEIMTKN PREVLKSIEN AGSIFLGNYA PVPVGDYASG
TNHVLPTSAC AKMYSGLSVE TFIKKPTVQE LTKEGLMEIG NIVTTLAEAE GLFNHSEAVK
RRLN