| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0203 |
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| Symbol | |
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| ID | 5328995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | + |
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| Start bp | 214101 |
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| End bp | 216545 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640792724 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001329424 |
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| Protein GI | 150402130 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01057] DNA topoisomerase I, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.698596 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGGAC TAATTATCTG TGAGAAACCA AACGTTGCTA AAAAAATTGC AGAAGCTCTT
GGAAAACCAA AGAAAAAATC CCATAATTCT GTGCCATATT ATGAAGTGGA ACGAAGTGGG
GAAAACGTAA TTGTAGCTTC AGCAGTAGGT CACCTCTACA CGCTCCAAGA AAAAACCAAA
ACCAAGTTTG GAGACTACCC TGTTTATGAT ATAGATTGGG TTCCAGCATC CACTCTCGAT
GAAAAAAAAT ATATTCAAAA ATACATCGAT GCACTGAAAA AAGTTTCAAA AGAAGCTAAC
AAGTTTTACG TTGCAACGGA CTGGGATATA GAAGGAGAAT TAATTGGATA CCACGCATTA
AATTTCTCAT GTGGACAAAA AAACGCTCAC AGATTAAGAT TTTCAAGTTT AACAAAAAAA
GAAATTGTAA AAGCTTATGA AACTCCGAAT GAAATAGATT TTGGGCTCGT TGATGCAGGA
GACAGTAGAC ACAAAATCGA CTGGTATTTT GGTATAAACG TTTCAAGAGC ACTCATGCAG
GCCGTAAGTT CTGTTAAACG ATGGAAAACC CTCAGTACAG GTAGGGTTCA AGGTCCAGCA
CTTGCTTTTT TAGTAGATAA AGAAATGGAA ATTAAAAATT TCGTTCCGAC ACCATACTGG
GTGCTTGAAG CTCTTTTGGA TAATGAATTA ATTGCAATTC ATGAACTTGA AAAATTCTGG
GATGAAGAAC AGGCGAATGA AGCTTTTGAA AAAGTAAAAG GCCAAAAGGA AGCTACTGTT
TCAGACGTTA AAAAAACCAT GAAAAGCATT CCTCCAAATC CGCCTTTCGA TTTAGGTGCA
CTTCAAAGAG AAGCACACAA CATGTTTAGA TTTTCACCTA AAAAAACACA GGAAATTGCA
CAAAAACTCT ATGAAAAAGG ATACTGTTCA TATCCAAGAA CGAGTTCCCA AAAACTTCCT
GATGATAAAG CGTACATGGA CGAAATATTG AAAAATCTTT CAAAAAATAA AAATTACAAG
CCATACATTG AAAGAATTTT AAGCGAAAAC AGAAAACCAA TTTCAGGTAA AAAGGACGAT
CCTGCGCACC CTGCGGTACA CGCAGTAGAC GTTCCAAAAG AACACCTGCC TGATGATGAG
TTAAAATTGT ATGAACTAAT TGCAAGAAGG ACTATTGCTC TTTACTGGGA TAATACTGAA
AGGGAATATT CAAAAATTAA TCTCGATATA AACGGTGAAC CATTCAAATT AAGCGGTTCG
AGAACCGTTA AGGAAGGCTG GCACGAAATT TACTACTACA CTAAATTTGA TGAGATAGAA
CTTCCCGATT TAAAGGAAAA AGACGTAATA AATGTAAATA ATATTAATTT CGAAGCAAAA
GAGACGAAGC CCCCAAAAAG ATACACAATG GCTTCAATTA TCAAGGAACT CGAAAAAAGA
AAACTCGGAA CAAAAGCAAC AAGGGCGGAC ATTCTTGAAA AACTGACCAA AAGAGGTTAC
GTGATTGAAG ATGGTTCTTT AACGGTTACC GACCTTGGAA TCGGAGTTAC CGAAACTTTG
AGAAAGTACT GTCCCGAAAT TGTTGAAGAA ACCCTTACAA GAGATCTTGA AGATAAATTG
GAACTTATTC AGGATAAAAA AATTAAAAAA GAAGATGTCA TAACAGAAAC ACAAAACAAG
CTTACCAAAA TCCTTGGAGA ATTCCGTTTA AAAGAAAAAG AAATTGGAAA TGAACTTGTA
GATAAACTCG ATTCGACAAA CCGATCTTTA CAGATAATTG GGAAGTGTAA ATGTGGTGGT
GACCTGATTA TCATCCGTAC AAAAGGCAAA AAAAGATTTG TTGGATGCAG CAATTACCCA
GACTGTGATG TTACATTCCC ACTACCTCAA AAAGGAAGAA TTAAAGTTTT AAATGAAGTC
TGTGAAACAT GCCATAACCC AATAATTGGA CTTGATAGGG TAAAAATTTG TGTAAATCCT
GATTGTACCA CAAGAATTTC AGAAGAAGAT AAAAAAGAAA TTGAAAAAGC AGAAAAAGAA
GAAAAAATAT GTCCAAAATG TGGTGGTAAG CTTTTAATCA AAAAAGGCCC TTACGGCGTA
TTCAGGGGCT GTGAAAATTA CCCAAAATGT AAATACACGG AAAAATTAAA CGGGGAATCC
AATGAAAAAG AAATCGTTGG AAAATGTCCA AAATGTGGAA GCGACTTATT TAAAAGAAGA
GGCAGATTTG GGGAATTTAT CGGATGTAGT AATTACCCAA AATGCAGGCA CACTGAAAAA
ATAGAAAAGA AAAAAGACGA TAACGCAGAT GGAACTAAAG CAGAAAAAAA TGAAGAACCA
AAACCAAAAA CCACTAAAAA ATCAGCTCCA AAAAAGACCG AAACTAAAAA AACTACCAAA
TCGACTGCTA AAAAAACAAC TGCAAAGAAA ACCACTAAAA AATGA
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| Protein sequence | MTGLIICEKP NVAKKIAEAL GKPKKKSHNS VPYYEVERSG ENVIVASAVG HLYTLQEKTK
TKFGDYPVYD IDWVPASTLD EKKYIQKYID ALKKVSKEAN KFYVATDWDI EGELIGYHAL
NFSCGQKNAH RLRFSSLTKK EIVKAYETPN EIDFGLVDAG DSRHKIDWYF GINVSRALMQ
AVSSVKRWKT LSTGRVQGPA LAFLVDKEME IKNFVPTPYW VLEALLDNEL IAIHELEKFW
DEEQANEAFE KVKGQKEATV SDVKKTMKSI PPNPPFDLGA LQREAHNMFR FSPKKTQEIA
QKLYEKGYCS YPRTSSQKLP DDKAYMDEIL KNLSKNKNYK PYIERILSEN RKPISGKKDD
PAHPAVHAVD VPKEHLPDDE LKLYELIARR TIALYWDNTE REYSKINLDI NGEPFKLSGS
RTVKEGWHEI YYYTKFDEIE LPDLKEKDVI NVNNINFEAK ETKPPKRYTM ASIIKELEKR
KLGTKATRAD ILEKLTKRGY VIEDGSLTVT DLGIGVTETL RKYCPEIVEE TLTRDLEDKL
ELIQDKKIKK EDVITETQNK LTKILGEFRL KEKEIGNELV DKLDSTNRSL QIIGKCKCGG
DLIIIRTKGK KRFVGCSNYP DCDVTFPLPQ KGRIKVLNEV CETCHNPIIG LDRVKICVNP
DCTTRISEED KKEIEKAEKE EKICPKCGGK LLIKKGPYGV FRGCENYPKC KYTEKLNGES
NEKEIVGKCP KCGSDLFKRR GRFGEFIGCS NYPKCRHTEK IEKKKDDNAD GTKAEKNEEP
KPKTTKKSAP KKTETKKTTK STAKKTTAKK TTKK
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