| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0189 |
|---|
| Symbol | |
|---|
| ID | 5329541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 199361 |
|---|
| End bp | 200173 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640792710 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001329410 |
|---|
| Protein GI | 150402116 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATTT TTTTGATTTA TTTACTTTTG GTAGTCGTTG GATGCATTGT GGGATTCACA
ACCGGTGCTT TGGGCCTCGG TGGCGGTTTT ATCATGGTTC CAACATTAAT GTACATTTTT
CAAAATCTCG GAATTTCTGA TGACCACGTT GTTGCAATGG CTGTTGGAAC GAGTCTTTCA
GTTATTTTTT TAACTTCACT AAATAGTGCT TATTCCCATT CAAAATTTGG AAACATTATT
TGGAGATATT CGATATTACT CGGGTTTTCA GGAATTTTGG GAACATTTGT GGGTGTTAGG
ATTGTTACAA ATTACATTAG TGGCGATCTT CACAGAATGC TCTTTGGGGT TATTTTGATA
ATTCTTTCAT TAAATATGGC ATTTAACAAA ACTAATCCTC AGGTCGAAAT CAATAAAAAC
GTTAATTATT TGCCTGTCGT ACTTTGCGGA TTTTTAATAG GGATTCTGTC AAGCATGTTT
GGAATTGGTG GCGGAACTAT TGCAATTCCG ATTTTGACGT TATTTTTAAA AACGCCTATA
AAAAGGAGTA TTGGTACATC CCTGGGAATG ATGGTAATCA TTTCATTAAG TGGTTTTTTG
GGCTATCTAT TTAGCCCTGT TGAAATAGCA GATACCTATA AATATCTAAA TTTCATAGGA
TATGTTTCAA TATCGGCAGC CCTGTCGATT GGTGCAATGA GTATTATATT TTCAAGATAT
GGCGCTAAAA TTTCAAATAA TATTAACTCC AAGCTTTTGA AGAAATTTTT TGGAATCATA
CTCATGTTTG TTGGATTAAC AATGATAATT TAA
|
|---|
| Protein sequence | MEIFLIYLLL VVVGCIVGFT TGALGLGGGF IMVPTLMYIF QNLGISDDHV VAMAVGTSLS
VIFLTSLNSA YSHSKFGNII WRYSILLGFS GILGTFVGVR IVTNYISGDL HRMLFGVILI
ILSLNMAFNK TNPQVEINKN VNYLPVVLCG FLIGILSSMF GIGGGTIAIP ILTLFLKTPI
KRSIGTSLGM MVIISLSGFL GYLFSPVEIA DTYKYLNFIG YVSISAALSI GAMSIIFSRY
GAKISNNINS KLLKKFFGII LMFVGLTMII
|
|---|
| |