Gene MmarC7_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0172 
Symbol 
ID5329150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp183626 
End bp184066 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content32% 
IMG OID640792693 
Productputative CheW protein 
Protein accessionYP_001329393 
Protein GI150402099 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0865787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.924879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGACG TTCCAAAAGT AGTAGTTTTC AAATTAGCAA GCAATGAATA CTGTTTAAGA 
GTAACAGGAG TAAGAGAAGT TTTAAAATTA CAAGATATTA CATCTATTCC AAATACTCCA
AGCTATATTG TCGGAGTTAC GAACATTCGT GGCGAAATCA TGCCAATCAT CGATCTTAGG
AAGAAATTAA ATCTTTTTGA GGATGTTGCT GATGAAGACA GTGAAAAGCT CGTAATGGTT
GTAGAAATCG ATGGTGTACC AATTGGAATT TTAGTTGATT CTGTAAGTGA CGTAATGCAA
ATTTCATCCG AACAGATTGA AGACATTGAA GGAATCAAGA AAAATGCAAG CGGAGAATAT
ATTGAAGGTA TTGCAAAAAT TGGAAATAGA TTAATCATTA TTCTTGACAT TAAAAATTTA
ATTGACCCAC AAGAATTCTA A
 
Protein sequence
MDDVPKVVVF KLASNEYCLR VTGVREVLKL QDITSIPNTP SYIVGVTNIR GEIMPIIDLR 
KKLNLFEDVA DEDSEKLVMV VEIDGVPIGI LVDSVSDVMQ ISSEQIEDIE GIKKNASGEY
IEGIAKIGNR LIIILDIKNL IDPQEF