Gene MmarC7_0164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0164 
SymboldapF 
ID5328025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp176409 
End bp177242 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content36% 
IMG OID640792685 
Productdiaminopimelate epimerase 
Protein accessionYP_001329385 
Protein GI150402091 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0253] Diaminopimelate epimerase 
TIGRFAM ID[TIGR00652] diaminopimelate epimerase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.543882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.191958 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTA CAAAAATGCA TGGTTTAGGC AACGATTATA TCTACGTAGA TGCTACCTCA 
CAAAAAATTG AAAATCCAAA CGAAATTTCA AGATTTGTGA GTGACAGGCA CTTTGGAATC
GGGTCAGATG GTCTTGTATT AATTCTTCCT TCAGAAATAG CTGACTTTAA AATGAGAATG
TTTAATTCAG ATGGTTCAGA AGCTGAAATG TGTGGTAATG CAATTCGTTG CGTTGGAAAG
TTCGTTTATG ATAAAAAAAT GACCGATAAA TCAACAATTA CGATTGAAAC ACTTGCAGGA
ATAAAGGTTC TTGAAATGAC TGTCGAAAAT GACAAGGTAG TTTTGGTAAA AGTCGATATG
GGAGAACCAA TCTTAAAAGC AGAAACAATT CCTGTTTTAA GTGAAAAACA CCCTGTAATC
GATGAAGAAA TAACTGCAAA AGATTACTGC TACAATTTCA CCTGCGTTTC AATGGGGAAC
CCGCATGCAA TAACATATAT TGAAAATGTA AGCGAATTCC CTCTTGAAAA AATCGGCCCA
TTATTTGAAT TTCACGAAAA ATTCCCAAGA AAAACAAATG TCGAGTTCGT TGAATTAATC
GATGATTCTA CTATTAAAAT GAGAGTTTGG GAAAGAGGTG CTGGGGAAAC GCTTGCTTGC
GGAACTGGAG CTTGCGCAGT TTTAGTTGCT TCCGTTTTAA AAGGATATGT TGGTAGAAAA
GCAACAGTCA AACTTCTCGG TGGAGATTTA ACAATTGAAT GGAATGAGAG TGACAATCAC
ATCTACATGA CCGGTCCAGC AACAACCGTC TTTGAAGGAG AAATTGATAT TTAA
 
Protein sequence
MKFTKMHGLG NDYIYVDATS QKIENPNEIS RFVSDRHFGI GSDGLVLILP SEIADFKMRM 
FNSDGSEAEM CGNAIRCVGK FVYDKKMTDK STITIETLAG IKVLEMTVEN DKVVLVKVDM
GEPILKAETI PVLSEKHPVI DEEITAKDYC YNFTCVSMGN PHAITYIENV SEFPLEKIGP
LFEFHEKFPR KTNVEFVELI DDSTIKMRVW ERGAGETLAC GTGACAVLVA SVLKGYVGRK
ATVKLLGGDL TIEWNESDNH IYMTGPATTV FEGEIDI