Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0114 |
Symbol | |
ID | 5328089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 131897 |
End bp | 133705 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640792635 |
Product | TPR repeat-containing protein |
Protein accession | YP_001329335 |
Protein GI | 150402041 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.606428 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.312557 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAAATAA AGGGGGTTTT ACTACTATTT TCAATTTTTT TTATTATGAA TACTTGTTAT GCTGGGACGA TTGGATCATC TACAGAAGAC TGGATTGACA GTGGACTTGA GTATTTTGGA AACGGAAACT TTGAAAAATC AATTGAAAGT TTTGATGAAA CTTTAAGGAT TAATCCGTAC AATATGGAAG CACTGGTCAG CAAGGGCTAT ATTTTATATG CCATAAATGA GTCTGAAAAA GCCATAGAAT GTTTTGATAA AGCATTGGAA ATCAATTCTG ACTATTACGA CACTTGGCAG TACAAAGGAT ATGCATTGCA TGATCTTGAA AGATACGAAG AAGCCATAGA ATGTTTTGAT AAGTCATTGG AAATATATGA AGAAAATCCA GAAGTTTACT ATATGAAAGG TGCCTCTTTA TATGGTCTTG AAAGATACGA AGAAGCCATA GAATGCCTTG ATATCGCTTT AGAAACCTAT CCAAATAACA TATACATGTT AACGGATAAA GGAAATACTC TTTATGAACT CGAAAGATAC GAAGAAGCCA TAGAATGTTT TGATAAAGCA TTAAAATATG TTAGTTATCT AAATGCTTGG AATGATAAAG GAAATACATT ATGTAAACTT GAAAGGTACA GTGAAGCAGT TCAATGTTAT GATAAAGCTT TAGAAATAGA TTCTAGCAGT TATGTTTTAT GGGGTAATAA AGGATATGCT ATTTATGAAC TTGGAAAATA TGAAAAAGCC ATAATATGTT TTGACAGATC TTTGGAATTA AATTTTGATT ATCTCGAGTC TAATTACTAT AAGGGGGATT CACTTTATGA ACTCGAAAGA TACGAAGAAG CCATAGAATG CTATGATAAA GCTTTAGAAA TAGATCCTAA AAATGAATAT ATTTGGTATA GTAAAGGCTG TTCTCTTTCA AATCTTGAAA GATACGAAGA AGCTATCGAG TGTTTGGATA AGGCTTTAGA AATAGATTCT AAAAATGAGA AATTCTGGAA TAAAAAAGGA TATTCTTTAA ACGAACTTGA AAGATACGAA GAAGCTAGCG AGTGTTTGGA TAAGGCTTTA GAAATAGATT CTAAAAATGA GAAATTCTGG AATAACAAAG GTTATGCTTT AGCAGGACTT GAAAGATACG AAGAAGCAAT AACCTGTTAT GATGAAGCAT TGGAATTAAA CAATAACTAT AGTAAGGCAT ATAAAAACAA AGGATATTCT TTGGCAGGAC TTGAAAGATA CGAAGAAGCC ATAGAATGCT ATGATAAAGC TTTAGAAATA GATTCTAATT ACACTAAAGC ACAGCAAAAT AAAGGAAATG CCCTTTTTGA ACTTGGAAAA TATGAGGAAG CACTTGAATG CTATGATTTA GTTATTGCAG TTGATAAAAG CAATGAAAAA GCATGGGCCG ATAAAGGAAA TGCCCTTTTT GAACTTGAAA GATACGAAGA AGCCATAGAA TGTTTTGATA AGGCCATTGA ATTAGATTCC AATGACAAAG AAATTTGGAA TAACAAAGGG GATACTCTTT ATAAACTCGA AAGATACGAA GAATCAATTG AATGCTATGA TGAAGCATTG GAATTAGATT CAGAAGATGA AGAACTTTGG AATAACAAAG GAAACATATT TTTTAAACTT GAAAACTATG AAGAAGCCTT AAAATGTTAC GATAGAGCAT TGGAAATAAA TACAAACTTT GAATTGGCAA AACTTGGAAA ACAAGATACT GAAGATCAAC TCAATAGTTT TTCATACATT TTAGCTAATT TCTTCAAAAA AATTTTTGGT GGTAATTAG
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Protein sequence | MKIKGVLLLF SIFFIMNTCY AGTIGSSTED WIDSGLEYFG NGNFEKSIES FDETLRINPY NMEALVSKGY ILYAINESEK AIECFDKALE INSDYYDTWQ YKGYALHDLE RYEEAIECFD KSLEIYEENP EVYYMKGASL YGLERYEEAI ECLDIALETY PNNIYMLTDK GNTLYELERY EEAIECFDKA LKYVSYLNAW NDKGNTLCKL ERYSEAVQCY DKALEIDSSS YVLWGNKGYA IYELGKYEKA IICFDRSLEL NFDYLESNYY KGDSLYELER YEEAIECYDK ALEIDPKNEY IWYSKGCSLS NLERYEEAIE CLDKALEIDS KNEKFWNKKG YSLNELERYE EASECLDKAL EIDSKNEKFW NNKGYALAGL ERYEEAITCY DEALELNNNY SKAYKNKGYS LAGLERYEEA IECYDKALEI DSNYTKAQQN KGNALFELGK YEEALECYDL VIAVDKSNEK AWADKGNALF ELERYEEAIE CFDKAIELDS NDKEIWNNKG DTLYKLERYE ESIECYDEAL ELDSEDEELW NNKGNIFFKL ENYEEALKCY DRALEINTNF ELAKLGKQDT EDQLNSFSYI LANFFKKIFG GN
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