Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0096 |
Symbol | |
ID | 5328364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 113437 |
End bp | 114066 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640792617 |
Product | hypothetical protein |
Protein accession | YP_001329317 |
Protein GI | 150402023 |
COG category | [R] General function prediction only |
COG ID | [COG4887] Uncharacterized metal-binding protein conserved in archaea |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.740238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00737296 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTATTATT GTGCACTATG CAATATAAAA GCCTGTAAAT CGGGCGAACC TGAAAAAATG CCGAAAAAAT GTCCAAATTC TAATGAAATA GTTGAAAAAA GTAAAGAATT ATATTTAAAA GAAGAAAATG AAAAAATTGC ATATAATTCC GCACTTGTAG AATCAGAAGG ATACTGTAAA CTTACGCGAA TTGAAGAAAC TATTTTGTTT GCAAAAAAAA TGAATTATAA AAAGCTTGGA ATTGCATTTT GCACCGGACT TTCAAATGAA GCTAAAGTTT TACAAAACAT ATTTTTGGAT CATGATTTTG AAGTTGAATC AGTTATCTGT AAGGCCGGAA GCATTCCTAA AGAATTCCTA AAAATAACCG AAAATGAAAA AGTTCACGAA TTTGAATTTG AAGCCATGTG TAACCCTATC GGCCAAGCAT TATTTTTAAA CGAAACAAAA ACAGATCTAA ATATCATACT CGGGCTCTGT GTGGGACACG ATTCACTATT TATAAAATAT TCAAAAGCGC CAGTTACAAT AATTGGTGTT AAAGACCGGG TTTTAGGACA TAATCCTTTA GCGGCCATTT ATACCGCAAA TAGCTACTAT AAGGAAAGAT TATTTAAAAA TAAAAAATAA
|
Protein sequence | MYYCALCNIK ACKSGEPEKM PKKCPNSNEI VEKSKELYLK EENEKIAYNS ALVESEGYCK LTRIEETILF AKKMNYKKLG IAFCTGLSNE AKVLQNIFLD HDFEVESVIC KAGSIPKEFL KITENEKVHE FEFEAMCNPI GQALFLNETK TDLNIILGLC VGHDSLFIKY SKAPVTIIGV KDRVLGHNPL AAIYTANSYY KERLFKNKK
|
| |