Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0093 |
Symbol | |
ID | 5328022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | + |
Start bp | 110123 |
End bp | 110746 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640792614 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_001329314 |
Protein GI | 150402020 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.60262 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000734751 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATCGAAA CTACTCAGTT ATTTTATTTT TTAATTGCAT CAGCTGCACT AACTATTCTT CCAGGGCCGG ATATACTATT TGTAACGGTT CAAAGTATAT CTCGGGGAAA ATGGGCTGGA ATTTCAACTG CACTCGGGTT ATGTACTGGA TTAATAGTTC ACACTACTGC AGCCGCAATT GGAATTTCTG CAATAATTTA TAATTCTGCC GTAGCATTTA CAATTGTGAA ATATCTGGGA GCTTTGTATT TATTATATCT TGCAGTAACT GTATTATGTG ATAAATCTGC ATTAGTTTCT GAATCAGTGG TTAAATTAGA TAAAATGGCA CTTTATAAAA AAGGAATATT TATGAATTTA TTAAATCCCA AGATTTCGTT ATTTTTCCTT GCATTTCTTC CGCAATTCGT AAATCTAAAT TCTGGAAGTG TTTCGATTCA GATGATAATT TTGGGTTTAG TTTTCATGCT ACAGGCAATT TTAATTTTTT CAGCTGTTGC AGTTTTTTCG AGCTTTTTTG GAGAAAAAAT ATTAAAAAGT CAGAAATTTG GAAAATATAT TAATATTGCT AAAGCAGGGA TTTTTGGTGT AATTGGGATT CAGCTGGCAC TTTCTACAAA GTAA
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Protein sequence | MIETTQLFYF LIASAALTIL PGPDILFVTV QSISRGKWAG ISTALGLCTG LIVHTTAAAI GISAIIYNSA VAFTIVKYLG ALYLLYLAVT VLCDKSALVS ESVVKLDKMA LYKKGIFMNL LNPKISLFFL AFLPQFVNLN SGSVSIQMII LGLVFMLQAI LIFSAVAVFS SFFGEKILKS QKFGKYINIA KAGIFGVIGI QLALSTK
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