Gene MmarC7_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0088 
Symbol 
ID5328092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp107041 
End bp107784 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content33% 
IMG OID640792609 
Producthypothetical protein 
Protein accessionYP_001329309 
Protein GI150402015 
COG category[S] Function unknown 
COG ID[COG4760] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00170259 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000347929 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGATAA ATATGAGAAC AAGTAATCCT GCTCTTTCAA ATGATACATT TACTGGATTT 
AATACCTACG GACAAAATCA AATGACAATA AATGGAACTG TAAATAAAAC AATAATTTCT
CTTGGAATCG TATCGATTTG TGCATATTTT TCATGGGACG TATTATTTTT TGGCCCATAT
TCTGGTATTT TAATGATATT AACTCCAATT TTAGGATTTG TAATGGCACT TGCAACGATA
TTTAAAAAGG AATGGGCACC AATGACAGTT CCGTTTTACT GTGTATTTGA AGGGCTATTT
TTAGGAATTA TTTCAGGATA TTTCGAGTTA ATGTATCCTG GAATTATATT TCAGGCAGTT
ATTGCAACGT TTGGAGTTTT ATTCAGCCTT TTACTTGCGT ACAAGTCGAA ATTAATCCGT
GCGACAGAAA ACTTTAAATT GGGAATTGTG GCTGCAACAG GTGGAATTGC TTTAATATAT
ATTATTTCAT TACTTTTGGG TTTATTTGGA ATACCAATAC CGTTAATATT TGGTAGCGGG
CCAGTTGGAA TATTATTCAG CCTTTTTGTA GTGATAATCG CGGCATTAAA CCTTGTTTTG
GATTTTGACT TTATTGAACA AGGTGAAAAA TATGGTGCAC CAAAATACAT GGAATGGTAT
GGGGCATTTG GATTGATGGT AACTTTGATC TGGTTATACC TTGAAATCTT AAGGTTGCTT
GCAAAATTAA GAAGTAGAGA TTAA
 
Protein sequence
MAINMRTSNP ALSNDTFTGF NTYGQNQMTI NGTVNKTIIS LGIVSICAYF SWDVLFFGPY 
SGILMILTPI LGFVMALATI FKKEWAPMTV PFYCVFEGLF LGIISGYFEL MYPGIIFQAV
IATFGVLFSL LLAYKSKLIR ATENFKLGIV AATGGIALIY IISLLLGLFG IPIPLIFGSG
PVGILFSLFV VIIAALNLVL DFDFIEQGEK YGAPKYMEWY GAFGLMVTLI WLYLEILRLL
AKLRSRD