Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0088 |
Symbol | |
ID | 5328092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | + |
Start bp | 107041 |
End bp | 107784 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640792609 |
Product | hypothetical protein |
Protein accession | YP_001329309 |
Protein GI | 150402015 |
COG category | [S] Function unknown |
COG ID | [COG4760] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00170259 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000347929 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGATAA ATATGAGAAC AAGTAATCCT GCTCTTTCAA ATGATACATT TACTGGATTT AATACCTACG GACAAAATCA AATGACAATA AATGGAACTG TAAATAAAAC AATAATTTCT CTTGGAATCG TATCGATTTG TGCATATTTT TCATGGGACG TATTATTTTT TGGCCCATAT TCTGGTATTT TAATGATATT AACTCCAATT TTAGGATTTG TAATGGCACT TGCAACGATA TTTAAAAAGG AATGGGCACC AATGACAGTT CCGTTTTACT GTGTATTTGA AGGGCTATTT TTAGGAATTA TTTCAGGATA TTTCGAGTTA ATGTATCCTG GAATTATATT TCAGGCAGTT ATTGCAACGT TTGGAGTTTT ATTCAGCCTT TTACTTGCGT ACAAGTCGAA ATTAATCCGT GCGACAGAAA ACTTTAAATT GGGAATTGTG GCTGCAACAG GTGGAATTGC TTTAATATAT ATTATTTCAT TACTTTTGGG TTTATTTGGA ATACCAATAC CGTTAATATT TGGTAGCGGG CCAGTTGGAA TATTATTCAG CCTTTTTGTA GTGATAATCG CGGCATTAAA CCTTGTTTTG GATTTTGACT TTATTGAACA AGGTGAAAAA TATGGTGCAC CAAAATACAT GGAATGGTAT GGGGCATTTG GATTGATGGT AACTTTGATC TGGTTATACC TTGAAATCTT AAGGTTGCTT GCAAAATTAA GAAGTAGAGA TTAA
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Protein sequence | MAINMRTSNP ALSNDTFTGF NTYGQNQMTI NGTVNKTIIS LGIVSICAYF SWDVLFFGPY SGILMILTPI LGFVMALATI FKKEWAPMTV PFYCVFEGLF LGIISGYFEL MYPGIIFQAV IATFGVLFSL LLAYKSKLIR ATENFKLGIV AATGGIALIY IISLLLGLFG IPIPLIFGSG PVGILFSLFV VIIAALNLVL DFDFIEQGEK YGAPKYMEWY GAFGLMVTLI WLYLEILRLL AKLRSRD
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