| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0082 |
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| Symbol | |
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| ID | 5327990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | - |
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| Start bp | 102506 |
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| End bp | 103111 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640792603 |
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| Product | ribonuclease H |
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| Protein accession | YP_001329303 |
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| Protein GI | 150402009 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3341] Predicted double-stranded RNA/RNA-DNA hybrid binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000796029 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000638977 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCTAAAA TCTATGCTGT TAGAAAAGGG CGAAAAACAG GACTATTTGA AACATGGGGC
GAATGTGAAA ATCAGGTCAA AGGATTTTCT GGAGCTGAAT TTAAAAGTTT TACATCTAAA
AAAGATGCAG AAATATATTT AAATCAAAAA ACTGAAGAAA AACAAAATAA TATACAGTCA
AACGAATTTG AAAAAGATGT AATGTATGCA TGGGTTGATG GAAGTTTTAA TTTAAAAAAT
AAAGAATATG GGGCAGGAGT TCTAACAATA TTCAACGGAA TTGAAAAAGA AATTAAAGCT
AAGGGAAATA ATAAGGAGTT ATCGAAAATG AGAAACGTTG CTGGCGAAAT TTTAGCTTCA
GAACTTGCAA TGGAATATGC AGTTTCTAAA AATGTAAAAA ATTTAATAAT ATACCACGAT
TATCTCGGAA TTGAAAAGTG GTGTACTGGC GAATGGAAAA CCAACAAGGA AGGAACCACC
GAATATAAAG AAAAATGTAA AAATTATCTA AAAAAGTTAA ATATTGAATT TGTAAAAGTT
AAGGCGCATT CCGGCGATAA AAATAACGAA ATTGCGGATA AACTGGCAAA AGAATCACTT
TTGTAA
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| Protein sequence | MSKIYAVRKG RKTGLFETWG ECENQVKGFS GAEFKSFTSK KDAEIYLNQK TEEKQNNIQS
NEFEKDVMYA WVDGSFNLKN KEYGAGVLTI FNGIEKEIKA KGNNKELSKM RNVAGEILAS
ELAMEYAVSK NVKNLIIYHD YLGIEKWCTG EWKTNKEGTT EYKEKCKNYL KKLNIEFVKV
KAHSGDKNNE IADKLAKESL L
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