Gene MmarC7_0075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0075 
Symbol 
ID5328075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp94127 
End bp94786 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content36% 
IMG OID640792596 
Productcobalamin B12-binding domain-containing protein 
Protein accessionYP_001329296 
Protein GI150402002 
COG category[R] General function prediction only 
COG ID[COG5012] Predicted cobalamin binding protein 
TIGRFAM ID[TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02370] methyltransferase cognate corrinoid proteins, Methanosarcina family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.916725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.540278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAT TAAAAGAACG GCTAATACAA GAACTTTCCG ACTCCGTTGT CGAAATGGAT 
GAAGAAAAAA CTGAAGAACT ATCTAAAAAA TATGTTGAAA ATGGATTTGA TGCATTCGAA
GGAATTACAG AAGGGCTTGC AGATGGGATG AATAGGGCAG GAGTACTTTA TGAAGAAGGA
GAATACTTTA TACCTGAACT TCTAGTCTGT TCTGATGCAA TGTACCTCGG TTTAGACATA
TTAAAACCTC ATTTGAAGTA TGCAGATTCA GATAGCAAAT TTAAGGCAGT TGTTGGTGTT
GTTGAAGGGG ATACTCACGA TATTGGGAAA AACTTATTTA AAATCATGTT AGAAACACAA
GGGTTTGAAG TTTATGATTT GGGTAGAGAT GTTCCACCTG TAGAATTTGT AAAAAAAGCT
AAAGAAATCA ATGCAGACGT AGTAGGACTT TCAACGCTCA TGACTACTAC AATGGACAAT
ATGAAAGTCG TTATTGACCT TTTGAAAGAA GAAGGAATGC GGGAAAAAAC GATTGTAATG
GTTGGGGGAG GTCCAATCTC ACAAAGTTTC GCAGATAAAA TCGGTGCAGA CGGCTATGCA
CCTGAGGCTT CAAAATCTGC AAGAATTGCA AAAGAATTGG TTACAAAATT AAAAAATTAA
 
Protein sequence
MSELKERLIQ ELSDSVVEMD EEKTEELSKK YVENGFDAFE GITEGLADGM NRAGVLYEEG 
EYFIPELLVC SDAMYLGLDI LKPHLKYADS DSKFKAVVGV VEGDTHDIGK NLFKIMLETQ
GFEVYDLGRD VPPVEFVKKA KEINADVVGL STLMTTTMDN MKVVIDLLKE EGMREKTIVM
VGGGPISQSF ADKIGADGYA PEASKSARIA KELVTKLKN