Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0020 |
Symbol | |
ID | 5328132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 30661 |
End bp | 31539 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640792541 |
Product | hypothetical protein |
Protein accession | YP_001329242 |
Protein GI | 150401948 |
COG category | [S] Function unknown |
COG ID | [COG3586] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.951877 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00117666 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCATTGT TTAAAATTTC TGGAAAATCT GTTGAAAAAA TGAATTCAAC GAAGAATATT GAGAGAAAAA TTCAAAATTT GTGTGAAAAC AACCTTGAAG AAATATTTGG TGTTAAATTT TTAAGGTCTG AATACCCGAC AACTACGGGC GGCCGTATGG ATACGTTAGG AATTGATTTT GAAGGAAATC CTGTAATTAT TGAATATAAA CAGGTTGAAA GCGAAAACAT AATTACTCAA GGGTTATTTT ATCTTGACTG GCTTATTGAC CACAAGGGAG ATTTTGAACA GGTTTTAAAT AAAGCCGGTG TTGAAATGGA AGTTTCATGG GATTCTCCGC GTGTTATTCT TGTTGCAAAA TCTTATTCTA AATATGACAC TTACGCAGTA AACCAGTTTT CTGGAAATAT CGAGCTCTGG AAATACATGA TTTATGATGA TGAAGTGTTA CATATCGAGA GAATAAACCT TGCAAAAGAT GAAAAAGAAA AAGCTATTCG CCATAAATCA AGAGTAACTT ATCAGACGTA TGAAATAGAC CACCACTTGG CAGGAAAACC TGAAAATATT GTAAATTTAT ATTATCTAGT TCGGGATGAA ATTTTAAAAC TTGATGAAAA TATTTCTGAA AAAATAAAGA AATTATATAT CGCTTATACT CTTGATAAGA ATTTTTGTGA GTTCGTTGTT CAGAAAAACG GTTTAAGAGC TTACATTAAT ATTAATAAAG ACATACTTGA AGATCCAAAG GATATTTCGG AAGATGTATC TTATAAGGGT CATTGGGGTT CAGGCTGTAC TTCTTTAAAA ATCGAAAAAG AAGAAGATAT TCCTTATGCA ATGGAATTAA TTAAACAAAG TTACGAGAAA AACCTTTAA
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Protein sequence | MSLFKISGKS VEKMNSTKNI ERKIQNLCEN NLEEIFGVKF LRSEYPTTTG GRMDTLGIDF EGNPVIIEYK QVESENIITQ GLFYLDWLID HKGDFEQVLN KAGVEMEVSW DSPRVILVAK SYSKYDTYAV NQFSGNIELW KYMIYDDEVL HIERINLAKD EKEKAIRHKS RVTYQTYEID HHLAGKPENI VNLYYLVRDE ILKLDENISE KIKKLYIAYT LDKNFCEFVV QKNGLRAYIN INKDILEDPK DISEDVSYKG HWGSGCTSLK IEKEEDIPYA MELIKQSYEK NL
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