Gene MmarC7_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0020 
Symbol 
ID5328132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp30661 
End bp31539 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content31% 
IMG OID640792541 
Producthypothetical protein 
Protein accessionYP_001329242 
Protein GI150401948 
COG category[S] Function unknown 
COG ID[COG3586] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.951877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00117666 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCATTGT TTAAAATTTC TGGAAAATCT GTTGAAAAAA TGAATTCAAC GAAGAATATT 
GAGAGAAAAA TTCAAAATTT GTGTGAAAAC AACCTTGAAG AAATATTTGG TGTTAAATTT
TTAAGGTCTG AATACCCGAC AACTACGGGC GGCCGTATGG ATACGTTAGG AATTGATTTT
GAAGGAAATC CTGTAATTAT TGAATATAAA CAGGTTGAAA GCGAAAACAT AATTACTCAA
GGGTTATTTT ATCTTGACTG GCTTATTGAC CACAAGGGAG ATTTTGAACA GGTTTTAAAT
AAAGCCGGTG TTGAAATGGA AGTTTCATGG GATTCTCCGC GTGTTATTCT TGTTGCAAAA
TCTTATTCTA AATATGACAC TTACGCAGTA AACCAGTTTT CTGGAAATAT CGAGCTCTGG
AAATACATGA TTTATGATGA TGAAGTGTTA CATATCGAGA GAATAAACCT TGCAAAAGAT
GAAAAAGAAA AAGCTATTCG CCATAAATCA AGAGTAACTT ATCAGACGTA TGAAATAGAC
CACCACTTGG CAGGAAAACC TGAAAATATT GTAAATTTAT ATTATCTAGT TCGGGATGAA
ATTTTAAAAC TTGATGAAAA TATTTCTGAA AAAATAAAGA AATTATATAT CGCTTATACT
CTTGATAAGA ATTTTTGTGA GTTCGTTGTT CAGAAAAACG GTTTAAGAGC TTACATTAAT
ATTAATAAAG ACATACTTGA AGATCCAAAG GATATTTCGG AAGATGTATC TTATAAGGGT
CATTGGGGTT CAGGCTGTAC TTCTTTAAAA ATCGAAAAAG AAGAAGATAT TCCTTATGCA
ATGGAATTAA TTAAACAAAG TTACGAGAAA AACCTTTAA
 
Protein sequence
MSLFKISGKS VEKMNSTKNI ERKIQNLCEN NLEEIFGVKF LRSEYPTTTG GRMDTLGIDF 
EGNPVIIEYK QVESENIITQ GLFYLDWLID HKGDFEQVLN KAGVEMEVSW DSPRVILVAK
SYSKYDTYAV NQFSGNIELW KYMIYDDEVL HIERINLAKD EKEKAIRHKS RVTYQTYEID
HHLAGKPENI VNLYYLVRDE ILKLDENISE KIKKLYIAYT LDKNFCEFVV QKNGLRAYIN
INKDILEDPK DISEDVSYKG HWGSGCTSLK IEKEEDIPYA MELIKQSYEK NL