| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0008 |
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| Symbol | |
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| ID | 5329531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | - |
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| Start bp | 15646 |
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| End bp | 16239 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640792531 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001329232 |
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| Protein GI | 150401938 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.508518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000270685 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAC TTTTTCTTTT TATTTTCGGG ATCATATTAG TTAGTTCATT TTCAGGCTGT
ACTGATAATA CTGACTATGT AGCAAAAGGA GATTCGTATC TAAGCCAAGG GCGTTATGAA
ATGGCCATAT TAAACTATGA TATCGCACTG GATAGCATAT TTTATAAAAT TAATCCAAAT
GATGAGATAT ATAAAAATAA AGGGATTGCA TTAGAAAACC TTGAACGTTA CGATGAATCC
CTTAGTTCAT ATGTAAGAGC TTATGAAATT GATCCTGAAA ACATTGATAC ATTATGTCAT
GTCGGAAATT TGCTTTTAAA ACTTGAACGT TACAATGATG CACTTCCATA CTATGAAAAA
GCACTTTCGA TTAAACCTGA AACCGAAGAT GCACTATATG GAAAAGCCAG AGTACTCCAG
TTTCAAGAAA ACTATGCTCA AGCTAACGGC TATTACGATG AAGTATTGAT ACTGAATGAA
AACAATACGC AAGCTCTTTA TAATAAAGGA TTAACATTAC AAAAAATTGG GAAATATTCT
GAAGCCAATA TTTACATTGA AAGAGCAAAA GAGCTGACGA ATGCCCAAAA TTAA
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| Protein sequence | MKKLFLFIFG IILVSSFSGC TDNTDYVAKG DSYLSQGRYE MAILNYDIAL DSIFYKINPN
DEIYKNKGIA LENLERYDES LSSYVRAYEI DPENIDTLCH VGNLLLKLER YNDALPYYEK
ALSIKPETED ALYGKARVLQ FQENYAQANG YYDEVLILNE NNTQALYNKG LTLQKIGKYS
EANIYIERAK ELTNAQN
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