| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0006 |
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| Symbol | |
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| ID | 5329529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | + |
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| Start bp | 10706 |
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| End bp | 13543 |
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| Gene Length | 2838 bp |
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| Protein Length | 945 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640792529 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001329230 |
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| Protein GI | 150401936 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.416534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000067994 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGTTTTCA ATCCAAAACA GGACGAAGTA GCTGAAAATA TTAATGGAAT TTATGTTGTG
GATGCAGGAC CTGGAACTGG GAAAACCCAC ACAATCACAA AACGATATTT AAATATTTTA
AATTCTGCGG ATATTGGTGA TATTTTACTT CTCACATTTA CAAAAAATGC TGCAGAAAAT
ATGAAAAAGA AAATATTTAA TAAAGTTATA AGCCACGATT CGTCCATAAA CCTTCTTGAT
GCAAATATTT CAACATTTCA CTCATTCTGT AATAAAATAT TACGGGAAAA CCCCGAAAGC
GCACCTTACT ACCTTGGAAT CAATGAACCA CTATCGAAAA ATTATTCGAT TTTAGAAAGT
TCAATCCTTG AAAACTACTT CTTTAAATCC GTTTACTACG ATTTTAAAGA AAAAAACCTT
GAAAAATACC CCGAAATATT TAAAACAGTT TCTAAAAACT ATTTTGAAAT TTTATTTTTG
ATAAAAAAAC TGCTTTCAAA AGGGATCTTT CCAACAAAGG ATGGATGGTT TTTAGATGGT
GAAAAAAGAC TTATTGGAGA TTTTGAAGAA TTTTTAAAAG TTTCCAATAA TTCAAATGCA
CCAGTTATGG GTAAAAAAGA TTTTACTCAA TCAAAAATGC TAAAAAAATT TAAAAGTTCG
GGGGATAAAG TATATCTTGA CACTCCCGAC GATATCGAAG AAAATAAACA AATCAGTCAA
AAGTACATTG AAGAATCGTT TAACGAAGAT AGGGCTGACT TGCTTTCATT TATTCATGAT
ATTTATTTTA ATTACATTGA AAAGTCAGTT ATCGAAAATA AACTCAATTT TGACTTTCTA
ACGATGTTTT CATACCTCAT GTTATATCAC GACCATAAAT TAAGGGAAAA TAATTCGTTT
AGGTATATTA TGGTCGATGA ATTTCAGGAT ACTAATGAGT TGCAATTTAT TTTAACATTA
ATGCTTTTAA AAGAGCCAAA TTTATGTGCT GTTGGAGACT GGAAACAGGG AATATATGGA
TTTAGAAATG CTACTATTGA TAATATATTG AATTTCGAAG AAAAGCTAAA TGAATATAAG
AACCTGTTAA ACGATGAATT TGAAAGAATT AAATTTGATT TAAATGCAGA AAACAAAGAA
TTTGTAATAA ATTTTAGAAG TTCACAAAAA ATCCTTGACT TTTCAAATAA CGCATTAATT
GCAAAAGGTT CGAGTTCTGA AGAAATAGAT TCCAACGAAA TTTTAAAAAA TGTTACAAAA
CTTTCTGCAA ATTTTGATAT GAAAGAATAT TCTGAAATTG AATTTATAAA TTCTAAAGAT
AAAGAATCTG AAATAAAATC GATTCTTTCA AAAATCTCGG AAATTGTAAA CAATGAAAAA
TACAAAATTG TTGATTATAA CGATGAAAAA CCGGTATTCC GGCCGATTGA ATATTCCGAC
ATTGCAGTTC TTTCAAGAAC TAGAAACTTC GGACTAGAAA TTCACAAACA CGCTAAAAAA
TTAGGAATTC CAGCAAAATA TGATGGTGGA ATTGAATTAT TTAATGCAAG GGAATCAGTT
TTAATTTTAG CATGGCTTAG GCTCCTTTCA AATATTGACG ACAAACGAGC ATGGGTTACA
ATACTTGCTG AAGATAATTA CCCATATTTG GAAAAGCGAA AAATTATTTC TGAAAAAGAA
TATCCTGAAA AATACATTGA ATTTAGGAAA AACTTGCAAA AAATTCAAAA TAATGTTATA
TTTTTAATTT CTGAAATTTT TAAACATTAC AACATAGATA ATGATTATTC TAATGCAATT
ACGGCCCAAA TATCTAGTCT TTGTTCCAAT AATTTAATAT CAACTAAAAT TTTAGCAAAT
TTCATTGAAG AAGCAATTCA AAACAATGAA ACTTTTGAAA TCGAAATAGA TTCTTCTCCA
AATTCGATCA CCATCCAGAC AGTTCACGGA TCAAAAGGGC TTGAATACCC TGTAGTATTC
ATTGTAAATT GTAACCAAAA AAATTTCCCA TCTGAAATGT CTGAAAAAGG ACTTTTAACC
CATTCTGATT TATATGGGGC TAGATTATCT AAAATATATG GAATTAAGGG GGAATATCAC
AGTTTATTTA ATAATTGGAA AGCAGATCTT TTAAAAGCTG CTGTTTTAAG GGAATATGAT
GAAGAGAGAA GACTGATGTT TGTTGCAATA ACTCGTGCAA AACAGTACGT TTATTTTACG
GCGTATAACC CTTCAAACTT TTTCAAGGAA TTATCTAGGG ATTTTTCAAT TTTAGAACCT
TCTGAATTCG AATTTTCTAA AATTGAGAAT GATGTAGAAA TTCAAAATAC TGAATTTGAA
CTTGAAAATT ATGTTAAACA GGGCCATATT TACAGTGTGC ATGATTTTAT AGATTTTACT
CCCTCTGAGG GTGGAAGAGG AATTGAATTT GGAAACTATA TTCACCACGT TGCAGAGCAG
TTCGCACTGA AAAAAGAGGT TTTTGACGAT TCAAAAGAGG TTTTAGAAGT TAAAAACTTT
ATAGATTCGT TAGACGCTAT TGAATTAATT CCTGAAATTG AATGTTCTCT TCCAGTAAAC
GGAAATTTAA TTCGGGGAAT TATTGATTTA CTTGCCATGT ATGATGATAA AATAGAAATA
ATTGATTATA AAACAGACGT TTCAAAAATA AACCATGAGG AATATAGAAA ACAGCTTTCA
ATTTATTATT ATGTTGTAAA AGAATATTTT AAAAAGAATA CATTATGTAA AATATATTAT
GTAAGTTTAG AGGAAGTTGT TGAAGTAAAT CCGTTGGGAT ATGATGAATT GGTTAGTTTA
ATGTCTGAAA GGATTTGA
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| Protein sequence | MVFNPKQDEV AENINGIYVV DAGPGTGKTH TITKRYLNIL NSADIGDILL LTFTKNAAEN
MKKKIFNKVI SHDSSINLLD ANISTFHSFC NKILRENPES APYYLGINEP LSKNYSILES
SILENYFFKS VYYDFKEKNL EKYPEIFKTV SKNYFEILFL IKKLLSKGIF PTKDGWFLDG
EKRLIGDFEE FLKVSNNSNA PVMGKKDFTQ SKMLKKFKSS GDKVYLDTPD DIEENKQISQ
KYIEESFNED RADLLSFIHD IYFNYIEKSV IENKLNFDFL TMFSYLMLYH DHKLRENNSF
RYIMVDEFQD TNELQFILTL MLLKEPNLCA VGDWKQGIYG FRNATIDNIL NFEEKLNEYK
NLLNDEFERI KFDLNAENKE FVINFRSSQK ILDFSNNALI AKGSSSEEID SNEILKNVTK
LSANFDMKEY SEIEFINSKD KESEIKSILS KISEIVNNEK YKIVDYNDEK PVFRPIEYSD
IAVLSRTRNF GLEIHKHAKK LGIPAKYDGG IELFNARESV LILAWLRLLS NIDDKRAWVT
ILAEDNYPYL EKRKIISEKE YPEKYIEFRK NLQKIQNNVI FLISEIFKHY NIDNDYSNAI
TAQISSLCSN NLISTKILAN FIEEAIQNNE TFEIEIDSSP NSITIQTVHG SKGLEYPVVF
IVNCNQKNFP SEMSEKGLLT HSDLYGARLS KIYGIKGEYH SLFNNWKADL LKAAVLREYD
EERRLMFVAI TRAKQYVYFT AYNPSNFFKE LSRDFSILEP SEFEFSKIEN DVEIQNTEFE
LENYVKQGHI YSVHDFIDFT PSEGGRGIEF GNYIHHVAEQ FALKKEVFDD SKEVLEVKNF
IDSLDAIELI PEIECSLPVN GNLIRGIIDL LAMYDDKIEI IDYKTDVSKI NHEEYRKQLS
IYYYVVKEYF KKNTLCKIYY VSLEEVVEVN PLGYDELVSL MSERI
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