Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3566 |
Symbol | |
ID | 5324454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3773197 |
End bp | 3774420 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640792515 |
Product | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase |
Protein accession | YP_001329216 |
Protein GI | 150398749 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase |
TIGRFAM ID | [TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00917822 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACACTGT CGGGAAAGCG TATCCTTCTC ATCATCTCCG GCGGCATCGC GGCATATAAA AGCCTCGACC TGATCCGCCG CCTGCGCGAG CGCGGCGCCG ACGTGCGTCC GGTGATGACG GCGGCGGCGC AGCGATTCGT GACGCCGCTC ACCGTCGGCG CACTTTCCGC CTCTCACGTC TTTACGGAGC TTTTTTCGCG CGAGGACGAA CAGGATGTCG GCCATATCCG GCTGGCGCGC CATTGCGATC TCGTCGTGGT GGCGCCGGCA ACGGCTGACC TCATGGCGAA GATTGCCAAT GGCCATGCCG ACGACCTCGC CTCGACGGTG CTCCTGGCGA CCGACCGGCC GGTGCTGCTC GCTCCGGCCA TGAACCCGAA GATGTGGATG CATCCGGCCA CACGCCGCAA CCGCGCGACG CTTGCCGGCG ACGGCGTCCG CTTTATCGGA CCCGGCACAG GTGAAATGGC TGAAAGCGGA GAGGCAGGTG AAGGCCGCAT GGCCGACCCT CTGGAGATCG TCGCGGCGGT AGAGGGAATG CTTGGCGAGA CGAGGATCGG CGGATCGGGG CCGCTCTCCG GCCGTAAGGC GATCGTCACT TCCGGCCCGA CGCACGAGCC GATCGATCCG GTTCGATACA TCGCCAACCG CTCGTCGGGA AAGCAGGGCC ACGCGATCGC AGCGGCACTT GCGCGGCTCG GTGCGGATGT CACGCTGATT TCGGGGCCGG TGACCATCGC GGATCCCGCC GGCGTGCGCG TCGTGCGGAT CGAGCGCGCC GAGGAGATGC GCGATGCCGT GCTGTCTGCT CTGCCCGCCG ATGTGGCCGT CATGGTGGCA GCGGTGGCCG ACTGGCGCGT CGCATCCACA GCCGGCAACA AGATCAAGAA GCGGCCGGGC GAGGCCCCGC CTTCACTTCG GCTTGCGGAA AATCCCGACA TCCTGAAGAC CGTGGGCCAC CACGCATCTC GGCCCAGGCT CGTGATCGGC TTTGCCGCGG AAACCGAGAA CGTCAGCGAG AACGGCCGCG CCAAACTTGA GAAGAAGGGT GCCGACTACA TTCTTGCCAA CGACGTCTCG CCCGAAACCG GCATCATGGG CGGCGACCGC AACCGCGTGA AGCTGATCGG CCGCGACGGA ACGGAGGACT GGCCAGAAAT GGGCAAGGAT GACGTGGCGG AGAAGCTGGC GGCTCTGATC GAGAAGAAGC TCTCCGCCCA GTAG
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Protein sequence | MTLSGKRILL IISGGIAAYK SLDLIRRLRE RGADVRPVMT AAAQRFVTPL TVGALSASHV FTELFSREDE QDVGHIRLAR HCDLVVVAPA TADLMAKIAN GHADDLASTV LLATDRPVLL APAMNPKMWM HPATRRNRAT LAGDGVRFIG PGTGEMAESG EAGEGRMADP LEIVAAVEGM LGETRIGGSG PLSGRKAIVT SGPTHEPIDP VRYIANRSSG KQGHAIAAAL ARLGADVTLI SGPVTIADPA GVRVVRIERA EEMRDAVLSA LPADVAVMVA AVADWRVAST AGNKIKKRPG EAPPSLRLAE NPDILKTVGH HASRPRLVIG FAAETENVSE NGRAKLEKKG ADYILANDVS PETGIMGGDR NRVKLIGRDG TEDWPEMGKD DVAEKLAALI EKKLSAQ
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