Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3564 |
Symbol | |
ID | 5324452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3770980 |
End bp | 3772110 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640792513 |
Product | oxidoreductase domain-containing protein |
Protein accession | YP_001329214 |
Protein GI | 150398747 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0520703 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCA GGCGCAGGCT GGGCATCGGC CTGATCGGCA CGGGCTTCAT GGGCAAGGCC CATGCTCTCG GCTTCACGAT TGCAGCGCGG GTCTTCGACC TGCCTTTCGA GCTGGACCTC GTATCCGTCG CGGACGTGAC TGTGGAGGGC GCGGAGGCGG CCAGGGGACG GCTCGGCTTC CGCAAGGCGA CCACCGACTG GCGCGACCTT CTGATCGACC CGGAGATCGA CGTCATCGAT ATCACCACGC CGAACCTCCT GCACAAGGAG ATGGCGCTCG CCGCGATTGC CCATGGTAAG CACGTCTATT GCGAAAAGCC GCTGGCCCCG ACGGTCGCCG ACTGCGCCGA GATGGTTGCG GCGGCCGAAA AGGCAGGGGT CGTCACCCAG CTCGGCTTCA ACTATCTCAA GAACCCGCTC ATTTTTCTCG CCAGGGACAT CATCGAAAGC GGCGAGATCG GCGAGATACG GTCGTTTCGC GGCGTTCACG CGGAGGACTT CATGGCGGAT CGGACCGTTC CCTGGGGCTG GCGGCTCGAT CCGCGCAGCG GCGGCGGGGC TCTTGCCGAC ATCGGCAGCC ATATGATCGC CTGCATGCGC CATCTCGTCG GGCCCGTTAG GTCCGTGCTG GCCGACTCCG TAATCCACGT TGCGGAACGC CCGCTCGCTC GCGGCGCAAC AGAGACCCGC GCCGTCGAAG TCGACGACGT AACGCGGGCT TTTGTTCGAT TCGAGAGCGG CGCAAGCGGG AGCTTCGAAG CCAACTGGAT CGCGACCGGC CGCAAGATGC AGCACGACTT CGAAATTTAC GGGTCAAAAG GCAGCATCGT CTTCACGCAG GAACGGCTGA ACGAAATCAA GATCTATTAT GCGGGCGACG ATATAAGGAG CCGCGGCTTC CGCACCATCT GGGCGGGTCC GGAACATCCG CCCTACGGGG CGTTCTGCGT CGCTCCGGGC CACCAGATCG GCTTCAACGA TCTGAAGGCG ATCGAGGTCC ACGAATTCCT GGAAGCGATC GCGAATGGCG TCAGGACGTC TACCGATTTC CGCGAGGGTT ATGAGGTCCA GAAGGTCCTC TCCGCGACCT ACCACTCCGC CCGGACGAAC GCCTGGGTGG AGATCGGGTG A
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Protein sequence | MSGRRRLGIG LIGTGFMGKA HALGFTIAAR VFDLPFELDL VSVADVTVEG AEAARGRLGF RKATTDWRDL LIDPEIDVID ITTPNLLHKE MALAAIAHGK HVYCEKPLAP TVADCAEMVA AAEKAGVVTQ LGFNYLKNPL IFLARDIIES GEIGEIRSFR GVHAEDFMAD RTVPWGWRLD PRSGGGALAD IGSHMIACMR HLVGPVRSVL ADSVIHVAER PLARGATETR AVEVDDVTRA FVRFESGASG SFEANWIATG RKMQHDFEIY GSKGSIVFTQ ERLNEIKIYY AGDDIRSRGF RTIWAGPEHP PYGAFCVAPG HQIGFNDLKA IEVHEFLEAI ANGVRTSTDF REGYEVQKVL SATYHSARTN AWVEIG
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