| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3560 |
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| Symbol | |
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| ID | 5324448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3765010 |
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| End bp | 3765912 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640792509 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_001329210 |
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| Protein GI | 150398743 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.27811 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCT ACGGAACCAA CCCGATCGCC TGGAGCAATG ACGACGACCA CTCGATCGGG
GCGCATCTGA CCCTCGAGGA CTGCCTTTCG GATTGTCAGA AAATCGGCTT CGACGGCATC
GAAAAGGGCC ACAAGATGCC TTCCGATCCG GAAGCGCTGA AGCGGAAGCT TGGCTCGTAT
GATCTCGTCT TCGTCTCGGG CTGGCACTCG ACCAATCTGC TGACCCATGA TGTCGAGGCG
GAGAAGAAGG CTATCCAGCC GCATCTCGAC CTTTTGAAGC ACAATGGCTG CAAGGTGGCG
ATCGTCTGCG AAACCTCGAA CGCCATCCAT GGGGACGATT CCAAGTCGCT CGTCAAGGAT
AAGCCGGTGC TGGCAGCGGA CGAGTGGAAG ACGTTCGGCG CCGATCTCGA GGCGATCGCC
GGATATTGCG CCAGCCAGGG CATCGACCTG GTCTATCATC ACCACATGGG CACCATCGTC
CAGACCGGCG AAGAGGTCGA CCTGTTGATG CAGAACACGG GTCCGGCGAC CAAGCTGCTG
CTCGACACCG GTCACGCCTG GTTCGGCGGC TCCGACCCGG CGGAACTGGC GCGGAAATAT
ATGGGCCGCG TTCGCCACAT TCATTGCAAG AACGTCCGCC CGGCCGTCCG GAAGGTGGTC
GAAAGCGAAG GATTGTCCTT CCTTGAAGGC GTACGCCGCG GCGTCTTTAC CGTTCCGGGC
GATTCCGAGG GCGGCATCGA TTTCCTGCCG GTCCTCAAAA TCGCGGCCGA ACACGACTAT
GACGGCTGGC TTGTGATAGA GGCTGAGCAG GATTCGGCCG TGCGCAACCC CTTCGACTAC
CAATCTCTGG GGCTGAAGTC ATTGAAGGCA TTGGCGAAGG AGGCGGGGCT GGAGAGAATG
TAG
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| Protein sequence | MIRYGTNPIA WSNDDDHSIG AHLTLEDCLS DCQKIGFDGI EKGHKMPSDP EALKRKLGSY
DLVFVSGWHS TNLLTHDVEA EKKAIQPHLD LLKHNGCKVA IVCETSNAIH GDDSKSLVKD
KPVLAADEWK TFGADLEAIA GYCASQGIDL VYHHHMGTIV QTGEEVDLLM QNTGPATKLL
LDTGHAWFGG SDPAELARKY MGRVRHIHCK NVRPAVRKVV ESEGLSFLEG VRRGVFTVPG
DSEGGIDFLP VLKIAAEHDY DGWLVIEAEQ DSAVRNPFDY QSLGLKSLKA LAKEAGLERM
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