| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3557 |
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| Symbol | |
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| ID | 5324445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3762428 |
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| End bp | 3763237 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640792506 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001329207 |
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| Protein GI | 150398740 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAG GGCATTTCAG GGTACTTCCG CGTCGCATTG CGGGCATCGA TGTGGTCGAG
GCAACGACGA ACCACAGTTT CGCCCGCCAT ACGCACGAAC AATTCGGCAT CGGCCTGGTC
CATGCCGGTG CGCAAACGTC GCTGAGCGGC CGCGGAACCG TCGCGGCGGA AGCCGGCGAC
GTGATCACAG TCAATCCCGG CGAGGTCCAT GACGGAGCGC CGATTGGCGA TCTCGGACGA
TCCTGGCGAA TGCTCTACCT CGATCCGCCG CTTGTGGCCG CGCTCGTCAA TGACGTCACC
GAAGGGAAAA GATCGAGTTG CGAATTCTCG GACCCGGTGA TCAGAAGCCC CACCCTTGCA
GGCCGCTTTC GGGCGATCTT CGCTGCTGCC ATAGCGGTCG ACAGCCCCGG GTCGACGCTT
TGCTGGGATG AACTCGCCGT CACTCTGTTC GCGGAGGCGA TGCAGCTTGC CCCGGCACGT
GCTCCGGCCA GCGTGTCCAG GTCGGTCGCC AGGGCCGTAA ACCTGATCGA CCACGATCCG
CTTGCGTCCG TGACGCTCGA GGACCTTGCC CGCGAGAGCG GATTGAGCCG CTTCCAGCTC
GTGCGCGGCT TTGCCAAGTC TACGGGTCTC ACACCTCATG CCTATCTCAT CCAGCGTCGG
ATGGACATCG TCCGGCGGCT GATTGCCGGG GGCACGCCAC TCGCTGAAGC GGCAACTGCC
GGTGGCTTCG CCGACCAGAG CCACATGACG CGCGTCTTCG TGCGCAAATA CGGCTTCTCG
CCCGGTGCCT ATGCGCAGGC AATGAACTAA
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| Protein sequence | MPKGHFRVLP RRIAGIDVVE ATTNHSFARH THEQFGIGLV HAGAQTSLSG RGTVAAEAGD
VITVNPGEVH DGAPIGDLGR SWRMLYLDPP LVAALVNDVT EGKRSSCEFS DPVIRSPTLA
GRFRAIFAAA IAVDSPGSTL CWDELAVTLF AEAMQLAPAR APASVSRSVA RAVNLIDHDP
LASVTLEDLA RESGLSRFQL VRGFAKSTGL TPHAYLIQRR MDIVRRLIAG GTPLAEAATA
GGFADQSHMT RVFVRKYGFS PGAYAQAMN
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