Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3554 |
Symbol | dut |
ID | 5324442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3759269 |
End bp | 3759751 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640792503 |
Product | deoxyuridine 5'-triphosphate nucleotidohydrolase |
Protein accession | YP_001329204 |
Protein GI | 150398737 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0756] dUTPase |
TIGRFAM ID | [TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.605324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAGAC CCGAAAATCG CGCTGATCTC ACCCCTGACC TCACCCTCGT CCGCCTGTCC CATGGCGAAG GCCTCGACCT GCCTGCCTAC GAGACCGCGG GTGCCGCCGG TATGGACCTC CGCGCGGCCG TCCCGGCAGA TGAGCCGATG ACGATCCGGC CGGGCGCGCG CACGCTGGTC CCGACGGGCT TCGTCTTCGA GATTCCGGCT GGTCATGAAG GACAGATTCG TCCGCGCTCC GGCCTTGCCT TCAAGCACGG CATTACCTGC CTCAACACGC CGGGCACCGT CGACAGCGAT TATCGCGGCG AAGTAAAGGT GCTGCTCGTC AATCTCGGCT CGGATGATTT CGTTGTCGAG CGCGGCATGC GTATCGCCCA GATGGTGATC GCCCCGGTCA CCCAAATGGC GATCCGCGAG GCAGACGGCG CGTCCACAAC CGCGCGCGGC GGCGGCGGCT TCGGCTCGAC GGGCCTCAGT TAA
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Protein sequence | MHRPENRADL TPDLTLVRLS HGEGLDLPAY ETAGAAGMDL RAAVPADEPM TIRPGARTLV PTGFVFEIPA GHEGQIRPRS GLAFKHGITC LNTPGTVDSD YRGEVKVLLV NLGSDDFVVE RGMRIAQMVI APVTQMAIRE ADGASTTARG GGGFGSTGLS
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