| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3549 |
|---|
| Symbol | |
|---|
| ID | 5324437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 3755212 |
|---|
| End bp | 3756180 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640792499 |
|---|
| Product | cysteine synthase A |
|---|
| Protein accession | YP_001329200 |
|---|
| Protein GI | 150398733 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAG CGCGCAAGCC CGGCCGTGGC CGCGTCTTTT CTTCGATCAC CGAGACGATC
GGCGACACTC CCATCGTGCG GCTGGACAAG CTCGCCAAGG AAAAGGGCGT GAAAGCAAAC
CTGCTCGCCA AGCTGGAATT CTTCAACCCC ATAGGCTCGG TGAAGGACCG CATCGGCGTT
GCGATGATCG AATCACTTGA GGAGCAGGGC AAGATCACCC CCGGCCGCAC AACGCTCGTC
GAGCCGACTT CCGGCAATAC GGGCATAGCG CTCGCCTTTG TGGCGGCTGC GAAAGGTTAC
CGGTTGATCC TCACCATGCC CGAAACCATG TCCGTCGAGC GGCGCAAGAT GCTGGCCCTT
CTCGGTGCCG AACTGGTGCT GACGGAGGGT GCCAAGGGCA TGAAGGGCGC GATCGCCAAG
GCCCAGGAAC TTACCGAGAC CCTTCCCGAC GCAATCATTC CGCAGCAGTT CGAAAATCCG
GCCAATCCGG AAATCCATCG CCAGACGACG GCCGAGGAGA TCTGGAACGA CACGGAAGGC
GCGGTTGACA TCCTCGTATC GGGCATCGGC ACGGGCGGTA CCATTACCGG CGCAGGCCAG
GTCTTGAAGG CGCGTAAGCC ATCGCTCCGG GTGATCGCCG TCGAGCCCGA GGAATCTCCG
ATACTCTCCG GCGGCGCCCC GGGTCCGCAC AAAATCCAGG GCATCGGCGC GGGATTCGCA
CCGGCGATCC TCGACACGAG CGTCTATGAC GAGGTCGTCA CCGTAAATGC CGGCGAGGCC
GTTGAAACAG CACGGCTCGT CGCCAGGCTC GAAGGCGTCC CGGTCGGTAT TTCCGCCGGT
GCGGCGCTCC AGGCGGCGAT CGAAATCGGC CAGCGCGAGG AAAACGCCGG CAAGAATATT
GTGGTGATCA TTCCCTCTTT TGCGGAGCGC TACCTGTCGA CGGTGTTGTT CGAGGGGTTG
GGAGCGTAG
|
|---|
| Protein sequence | MSEARKPGRG RVFSSITETI GDTPIVRLDK LAKEKGVKAN LLAKLEFFNP IGSVKDRIGV
AMIESLEEQG KITPGRTTLV EPTSGNTGIA LAFVAAAKGY RLILTMPETM SVERRKMLAL
LGAELVLTEG AKGMKGAIAK AQELTETLPD AIIPQQFENP ANPEIHRQTT AEEIWNDTEG
AVDILVSGIG TGGTITGAGQ VLKARKPSLR VIAVEPEESP ILSGGAPGPH KIQGIGAGFA
PAILDTSVYD EVVTVNAGEA VETARLVARL EGVPVGISAG AALQAAIEIG QREENAGKNI
VVIIPSFAER YLSTVLFEGL GA
|
|---|
| |