Gene Smed_3531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3531 
Symbol 
ID5324419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3740205 
End bp3740579 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content61% 
IMG OID640792481 
Productrare lipoprotein A 
Protein accessionYP_001329182 
Protein GI150398715 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGCCAG CGAAAATCAA GACTGCTGCC GCGGCAGCAC TATTCACCGC CGGGATCGGG 
TTTGTCTCGG CCTCCGATAG TCAGGCAGCA GGCGCCGGTT GCGGCGGGGC ATCCTGGTAC
GCGCTTTCCT CTAAAACGGC TTCCGGCGAA AGAATGAACG CCGCGCACCT GACCGCCGCA
CACCGGAAAC TGAAGTTCGG CACCAAGGTT CAGGTCACCA ATAAACGCAA CGGCAAGTCC
GTCATCGTCC GGATCAATGA TCGCGGCCCG TTCATTCGCG GCCGGGTGAT CGACCTCTCT
AAGGCCGCCG CCTCGAAGAT CGGCATGATC CGCTCGGGCA CCGCCAGCAT CTGTTACACG
GTCGTGAATT CCTGA
 
Protein sequence
MTPAKIKTAA AAALFTAGIG FVSASDSQAA GAGCGGASWY ALSSKTASGE RMNAAHLTAA 
HRKLKFGTKV QVTNKRNGKS VIVRINDRGP FIRGRVIDLS KAAASKIGMI RSGTASICYT
VVNS