Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3531 |
Symbol | |
ID | 5324419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3740205 |
End bp | 3740579 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640792481 |
Product | rare lipoprotein A |
Protein accession | YP_001329182 |
Protein GI | 150398715 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGCCAG CGAAAATCAA GACTGCTGCC GCGGCAGCAC TATTCACCGC CGGGATCGGG TTTGTCTCGG CCTCCGATAG TCAGGCAGCA GGCGCCGGTT GCGGCGGGGC ATCCTGGTAC GCGCTTTCCT CTAAAACGGC TTCCGGCGAA AGAATGAACG CCGCGCACCT GACCGCCGCA CACCGGAAAC TGAAGTTCGG CACCAAGGTT CAGGTCACCA ATAAACGCAA CGGCAAGTCC GTCATCGTCC GGATCAATGA TCGCGGCCCG TTCATTCGCG GCCGGGTGAT CGACCTCTCT AAGGCCGCCG CCTCGAAGAT CGGCATGATC CGCTCGGGCA CCGCCAGCAT CTGTTACACG GTCGTGAATT CCTGA
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Protein sequence | MTPAKIKTAA AAALFTAGIG FVSASDSQAA GAGCGGASWY ALSSKTASGE RMNAAHLTAA HRKLKFGTKV QVTNKRNGKS VIVRINDRGP FIRGRVIDLS KAAASKIGMI RSGTASICYT VVNS
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