Gene Smed_3499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3499 
Symbol 
ID5324387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3706213 
End bp3706803 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content62% 
IMG OID640792451 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_001329152 
Protein GI150398685 
COG category[R] General function prediction only 
COG ID[COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATAC TCCTGGTGCT TGCCCACCCG CTCGAGAATA GCTTTGCGGC AAGCGTCGCC 
AGAACAGCCA AGGAGAGCCT GGAGGCGAAA GGCCACACGG TTGATCTGCT CGATCTGTAT
CGAGACGGCT TCGATCCGAG GCTGACCGTT GCTGAACGCG GCAGCTATTT CGACGAGCGC
TACGACTCCT CGGAGGTCTC CGTCTGGGTC GACCGACTCA AGGCCGCGGA CGGGCTCATG
CTCGTCTTTC CACAATGGTG GTTCAATTTC CCGGCGATCC TCAAAGGTTT CTTCGATCGT
GTCTTCGCTC CCGGGGTCGC TTTCGACCAT GATCGCGCAG GCGGCCGTAT CATGCCGCGG
CTCGGCAACA TCAAGCTATT CTGGGCGCTG ACCAGTACCG GGTCCCCCTG GTGGGTCGTG
CATCTCTACA TGGGAAATCC GGTGCGGCGC CTGCTGAAGC GCGGCATCGC CGCCTTCTGC
GGCAAGGGGC TCGACTTCCG CATGATCGCT CTGCACGACA TGGATCGGGT GACTGAAGCG
AAGCGGAAAC GCCATCTCGA GCGGGTGAGA GCGCTGGTGA GCCGGATCTG A
 
Protein sequence
MRILLVLAHP LENSFAASVA RTAKESLEAK GHTVDLLDLY RDGFDPRLTV AERGSYFDER 
YDSSEVSVWV DRLKAADGLM LVFPQWWFNF PAILKGFFDR VFAPGVAFDH DRAGGRIMPR
LGNIKLFWAL TSTGSPWWVV HLYMGNPVRR LLKRGIAAFC GKGLDFRMIA LHDMDRVTEA
KRKRHLERVR ALVSRI