Gene Smed_3488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3488 
Symbol 
ID5324376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3696215 
End bp3696574 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content61% 
IMG OID640792440 
Producthypothetical protein 
Protein accessionYP_001329141 
Protein GI150398674 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGG AGCAGGCCAT CAGCGCGGTC GTCCATCTCT ATGTCGACGG CATGGCCTTC 
GCGAACGAGG GAGCGTTGCG AAAGGCCTTC CATCCGAACG CATCGGTCGT CGGCACTTCC
GGCGGGGCCG TCGAGTGGAT GACACGCGAC GCTTTCATTG CCGCGGTCAC AAAAGAAGGC
GCGGCGCCTC CGGATGCGCA ACCGCTCATG GAAGTGGAGA TGGTCGACAT GACAGGCGAT
ATCGCCAGCG TGAAGGTGAT CGATGAATTT GCCGGCGCGC GCTATTCCGA CTATCTGTCC
TTGCTGAAGG TCGACGGCCG GTGGCTGATC GTCAACAAGG TCTGGCACCG TCACGGTTAG
 
Protein sequence
MSEEQAISAV VHLYVDGMAF ANEGALRKAF HPNASVVGTS GGAVEWMTRD AFIAAVTKEG 
AAPPDAQPLM EVEMVDMTGD IASVKVIDEF AGARYSDYLS LLKVDGRWLI VNKVWHRHG