Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3485 |
Symbol | rplT |
ID | 5324373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3691847 |
End bp | 3692251 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640792437 |
Product | 50S ribosomal protein L20 |
Protein accession | YP_001329138 |
Protein GI | 150398671 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0292] Ribosomal protein L20 |
TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.500109 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGTG TAAAACGCGG CGTAACCTCC CACGCCAAGC ACAAGAAGAC GCTCAAGGCA GCCAAGGGTT TCTACGGCCG CCGCAAGAAC ACCATCCGCG CCGCCAAGGC AGCGGTTGAC CGTTCGAAGC AGTTCGCCTA CCGCGACCGC AAGGTCAACA AGCGCAATTT CCGTGCGCTC TGGATCCAGC GCATCAACGC TGCCGTCCGC GAATTCGGCC TCACCTACGG CCGCTTCATC GACGGTCTGA ACAAGGCCGG CATCGAAGTC GATCGCAAGG TACTGTCCGA CATGGCGATC CATGAGCCGG CAGCATTCGG CGCTCTGGTC GAAGCTTCCA AGAAGGCGCT TGCCTATCTC AAGGATGCCG GCACGGCAAA CGAGTTTGAA AGCGCTGTCC GTTAA
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Protein sequence | MARVKRGVTS HAKHKKTLKA AKGFYGRRKN TIRAAKAAVD RSKQFAYRDR KVNKRNFRAL WIQRINAAVR EFGLTYGRFI DGLNKAGIEV DRKVLSDMAI HEPAAFGALV EASKKALAYL KDAGTANEFE SAVR
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