| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3481 |
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| Symbol | |
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| ID | 5324369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3688834 |
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| End bp | 3689454 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640792433 |
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| Product | transglutaminase family protein cysteine peptidase BTLCP |
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| Protein accession | YP_001329134 |
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| Protein GI | 150398667 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3672] Predicted periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00539194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCTT TGACCGGGGT TAAGGCAAGT TTCGCGGCCT TGTGCGCGCT TTTCATTTCA
ACGAACACGG CAATTCCCGC ACAGGCGGGA GCCACTCCCT GGATGCAGAC CGGGGCGGTG
ACGTCGCAGC CGATCGGCCA TTACGAGTTC TGTCAAAAGT ACAGGGGCGA ATGCAGCGTC
CGTTCGAAGT CGACGGTGGC GCCGCGCGTC ACTGCGCGCG GCTGGGCCGC CATTCGCCAG
GTCAATGCCT CGGTCAACCG GCAGATCGCG CCTGTAACCG ATATCGAGCT TAACGGCCGG
GACGAGGTTT GGTCCTATCC GAAGGCGCAG GGCGATTGCG AGGACTTCGC GCTGGAGAAG
CGCAGACGCC TCATGCAGAA GGGCTTTTCC GCCGGCAACC TGCTGATGAC CGTGGTGCGC
AAGCCTGACG GCGAGGGTCA TGCGGTACTC ACCGTCCGCA CGGCTCAAGG CGACTTCGTT
CTCGACAATC TCGACAACAG CGTGAGATTG TGGACACACA CGCCCTACCG CTTCCTCAAG
CGCCAGGCCA CGAACCATAG CGGTCGCTGG GTCACCATCG ACAATGGCGG CGAAGTGCTC
GTCGGCTCCG TCGGAAACTG A
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| Protein sequence | MSSLTGVKAS FAALCALFIS TNTAIPAQAG ATPWMQTGAV TSQPIGHYEF CQKYRGECSV
RSKSTVAPRV TARGWAAIRQ VNASVNRQIA PVTDIELNGR DEVWSYPKAQ GDCEDFALEK
RRRLMQKGFS AGNLLMTVVR KPDGEGHAVL TVRTAQGDFV LDNLDNSVRL WTHTPYRFLK
RQATNHSGRW VTIDNGGEVL VGSVGN
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